RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 GAS7O60861 476 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 RAD17O75943 681 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 TNFRSF1AP19438 455 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 SELENOPP49908 381 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 ATP2C1P98194 919 aaPredicted RBP5.72□□□□□ -1.49
VPS41-213ENST00000485955 SAFB2Q14151 953 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS41-213ENST00000485955 KANSL1Q7Z3B3 1105 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 NOP9Q86U38 636 aaKnown RBP5.72□□□□□ -1.49
VPS41-213ENST00000485955 NME9Q86XW9 330 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 OR5AN1Q8NGI8 311 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 NKD2Q969F2 451 aaPredicted RBP5.72□□□□□ -1.49
VPS41-213ENST00000485955 MFSD3Q96ES6 412 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 BORCS6Q96GS4 357 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
VPS41-213ENST00000485955 MYL10Q9BUA6 226 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 KCMF1Q9P0J7 381 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 DENND2AQ9ULE3 1009 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 PLAAQ9Y263 795 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 VWA7Q9Y334 891 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 TCAF1Q9Y4C2 921 aa5.72□□□□□ -1.49
VPS41-213ENST00000485955 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 ENPP3O14638 875 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 PLSCR1O15162 318 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 SLC26A4O43511 780 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 PRPF6O94906 941 aaKnown RBP5.71□□□□□ -1.5
VPS41-213ENST00000485955 APOL3O95236 402 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 COMTP21964 271 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 ADCY7P51828 1080 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 ADCY1Q08828 1119 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 FOXL1Q12952 345 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 DGKDQ16760 1214 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 KLHDC10Q6PID8 442 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 PHYKPLQ8IUZ5 450 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 GPR101Q96P66 508 aaPredicted RBP5.71□□□□□ -1.5
VPS41-213ENST00000485955 ADOQ96SZ5 270 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 MS4A5Q9H3V2 200 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 SPTLC3Q9NUV7 552 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 SLC30A1Q9Y6M5 507 aa5.71□□□□□ -1.5
VPS41-213ENST00000485955 GSG1L2A8MUP6 293 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 ELL2O00472 640 aaPredicted RBP5.7□□□□□ -1.5
VPS41-213ENST00000485955 MUSKO15146 869 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
VPS41-213ENST00000485955 GYS2P54840 703 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 ADCY2Q08462 1091 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 GIMAP6Q6P9H5 292 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 PPM1KQ8N3J5 372 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 EFHBQ8N7U6 833 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 C7orf31Q8N865 590 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 DYDC2Q96IM9 177 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 CDK5RAP1Q96SZ6 601 aaKnown RBP5.7□□□□□ -1.5
VPS41-213ENST00000485955 HAPLN2Q9GZV7 340 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 PLA2G3Q9NZ20 509 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 DNAI1Q9UI46 699 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 TESMINQ9Y4I5 508 aa5.7□□□□□ -1.5
VPS41-213ENST00000485955 RBM8AQ9Y5S9 174 aaKnown RBP5.7□□□□□ -1.5
VPS41-213ENST00000485955 A0A0A6YYK5 440 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 TLDC2A0PJX2 215 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 H2AFYO75367 372 aaKnown RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 MYCLP1P12525 358 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 HNRNPLP14866 589 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS41-213ENST00000485955 MSX2P35548 267 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 RPS19P39019 145 aaKnown RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 SCNN1BP51168 640 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 BCAR1P56945 870 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 LRRC32Q14392 662 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 GRM7Q14831 915 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 PLEKHG4Q58EX7 1191 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 MAMDC4Q6UXC1 1216 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 BMP8AQ7Z5Y6 402 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 SHCBP1Q8NEM2 672 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 EDAQ92838 391 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 TMEM176AQ96HP8 235 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 RPL10LQ96L21 214 aaKnown RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 GPHA2Q96T91 129 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 SOX7Q9BT81 388 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 PITHD1Q9GZP4 211 aaPredicted RBP5.69□□□□□ -1.5
VPS41-213ENST00000485955 MTG2Q9H4K7 406 aa5.69□□□□□ -1.5
VPS41-213ENST00000485955 A0A0A6YYJ9 748 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 PMS2P1A4D2B8 440 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 AMHP03971 560 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 ADAM8P78325 824 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 RIN1Q13671 783 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 PRKD1Q15139 912 aaPredicted RBP5.68□□□□□ -1.5
VPS41-213ENST00000485955 HS1BP3Q53T59 392 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 KIAA1841Q6NSI8 718 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 POLNQ7Z5Q5 900 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 CLEC14AQ86T13 490 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 ZZZ3Q8IYH5 903 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 ZNF808Q8N4W9 903 aaPredicted RBP5.68□□□□□ -1.5
VPS41-213ENST00000485955 LEO1Q8WVC0 666 aaPredicted RBP5.68□□□□□ -1.5
VPS41-213ENST00000485955 RABGGTAQ92696 567 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 GFM2Q969S9 779 aaKnown RBP5.68□□□□□ -1.5
VPS41-213ENST00000485955 WDR92Q96MX6 357 aa5.68□□□□□ -1.5
VPS41-213ENST00000485955 NELFAQ9H3P2 528 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms