RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RAPGEFL1Q9UHV5 662 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 TRPV2Q9Y5S1 764 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
SF3A1-208ENST00000485618 H0YCG3 227 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 GOLGA6L22H0YM25 854 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 GPR182O15218 404 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 STBD1O95210 358 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 PLA2G4BP0C869 781 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CYP11B2P19099 503 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CMA1P23946 247 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 LAMA2P24043 3122 aaKnown RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CDC25AP30304 524 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CYP2C18P33260 490 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 STAT6P42226 847 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 SMTNP53814 917 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CCL23P55773 120 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 NPEPPSP55786 919 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 EMC2Q15006 297 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 PCBP1Q15365 356 aaKnown RBP eCLIP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 PSRC1Q6PGN9 363 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 CEP57L1Q8IYX8 460 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 KIAA0319LQ8IZA0 1049 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 TRAPPC12Q8WVT3 735 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 GBP4Q96PP9 640 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 FTHL17Q9BXU8 183 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 BHMT2Q9H2M3 363 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 DHX33Q9H6R0 707 aaKnown RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 C17orf75Q9HAS0 396 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 MAGEF1Q9HAY2 307 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 IL23AQ9NPF7 189 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
SF3A1-208ENST00000485618 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
SF3A1-208ENST00000485618 IGKV6-21A0A0C4DH24 114 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 A0A1W2PQ27 194 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 A0A1W2PQ64 194 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 A0A1W2PQD8 194 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 PP2D1A8MPX8 630 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 BAIAP3O94812 1187 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 FGBP02675 491 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 EIF4BP23588 611 aaKnown RBP9.17□□□□□ -0.94
SF3A1-208ENST00000485618 PHKA2P46019 1235 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 EFNA5P52803 228 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 POU5F1BQ06416 359 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 IKBKEQ14164 716 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 FAM102BQ5T8I3 360 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 RUFY4Q6ZNE9 571 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 APBB1IPQ7Z5R6 666 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ZNF410Q86VK4 478 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 RHPN2Q8IUC4 686 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ZBTB8OSQ8IWT0 167 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 SYT2Q8N9I0 419 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-208ENST00000485618 PPP1R13LQ8WUF5 828 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
SF3A1-208ENST00000485618 C2orf40Q9H1Z8 148 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 PCDHA7Q9UN72 937 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 GINS2Q9Y248 185 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
SF3A1-208ENST00000485618 ABHD14A-ACY1A0A1B0GW23 586 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 USO1O60763 962 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TBCAO75347 108 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 CTSHP09668 335 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 SRGAP2CP0DJJ0 459 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 CSF2RAP15509 400 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PLCG1P19174 1290 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 SFPQP23246 707 aaKnown RBP eCLIP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 GUCY2CP25092 1073 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PBX2P40425 430 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 CLCN3P51790 818 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 NLRP11P59045 1033 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 LAMTOR4Q0VGL1 99 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PAK2Q13177 524 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 KARSQ15046 597 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TMEM119Q4V9L6 283 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 CNKSR3Q6P9H4 555 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TSHZ1Q6ZSZ6 1077 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 LRRC71Q8N4P6 559 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 DEPTORQ8TB45 409 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PRPF31Q8WWY3 499 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 PPM1EQ8WY54 764 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 LARP4BQ92615 738 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 DHX38Q92620 1227 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 RAD54LQ92698 747 aa9.16□□□□□ -0.94
SF3A1-208ENST00000485618 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
SF3A1-208ENST00000485618 TMEM143Q96AN5 459 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms