RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 TUBB4AP04350 444 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 PSMC2P35998 433 aaKnown RBP18.33■□□□□ 0.52
CTSA-207ENST00000484855 CYP2J2P51589 502 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 GTF2BQ00403 316 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 MEA1Q16626 185 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 MTERF2Q49AM1 385 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 KCNV1Q6PIU1 500 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 WDR59Q6PJI9 974 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 MKNK1Q9BUB5 465 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 PAXBP1Q9Y5B6 917 aa18.33■□□□□ 0.52
CTSA-207ENST00000484855 OATP04181 439 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
CTSA-207ENST00000484855 SMTNP53814 917 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 TCERG1LQ5VWI1 586 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 METTL7BQ6UX53 244 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 FBXO16Q8IX29 292 aaPredicted RBP18.32■□□□□ 0.52
CTSA-207ENST00000484855 LSM14BQ9BX40 385 aaKnown RBP18.32■□□□□ 0.52
CTSA-207ENST00000484855 DMAC2Q9NW81 257 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 FRMD4BQ9Y2L6 1034 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 IGKV6D-21A0A0A0MT36 114 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 GSTTP1A0A1W2PQM5 241 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 CCDC169A6NNP5 214 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 ATP4AP20648 1035 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
CTSA-207ENST00000484855 KIF18AQ8NI77 898 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 CRACR2AQ9BSW2 395 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 MLXIPQ9HAP2 919 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 C17orf75Q9HAS0 396 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
CTSA-207ENST00000484855 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
CTSA-207ENST00000484855 ARIH2O95376 493 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 NPTX2P47972 431 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 SOX10P56693 466 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 FAM160B1Q5W0V3 765 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 CACNA2D4Q7Z3S7 1137 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 SLC9A9Q8IVB4 645 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 ACRBPQ8NEB7 543 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 MORC4Q8TE76 937 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 EDEM3Q9BZQ6 932 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 PDLIM7Q9NR12 457 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
CTSA-207ENST00000484855 ASB14A6NK59 587 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 SYT10Q6XYQ8 523 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 SLC35C1Q96A29 364 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 BORCS6Q96GS4 357 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 PARK7Q99497 189 aaKnown RBP18.31■□□□□ 0.52
CTSA-207ENST00000484855 KMT5AQ9NQR1 393 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 XPNPEP1Q9NQW7 623 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 CEP72Q9P209 647 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
CTSA-207ENST00000484855 POLGP54098 1239 aaPredicted RBP18.3■□□□□ 0.52
CTSA-207ENST00000484855 ETF1P62495 437 aaKnown RBP18.3■□□□□ 0.52
CTSA-207ENST00000484855 TMEM161BQ8NDZ6 487 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 SPIRE2Q8WWL2 714 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 SEPT1Q8WYJ6 367 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 BSNDQ8WZ55 320 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 HVCN1Q96D96 273 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 PCYT2Q99447 389 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 KIFC3Q9BVG8 833 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 UQCRHLA0A096LP55 91 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 EXOC3O60645 756 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 NDUFA10O95299 355 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 UQCRHP07919 91 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 TCF7P36402 384 aaPredicted RBP18.3■□□□□ 0.52
CTSA-207ENST00000484855 RTP1P59025 263 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 EMC2Q15006 297 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 RRAGAQ7L523 313 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 MYRIPQ8NFW9 859 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 BAP1Q92560 729 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 POLR3FQ9H1D9 316 aaPredicted RBP18.3■□□□□ 0.52
CTSA-207ENST00000484855 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 EXOC7Q9UPT5 735 aa18.3■□□□□ 0.52
CTSA-207ENST00000484855 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
CTSA-207ENST00000484855 LRRC53A6NM62 1247 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 RIOK3O14730 519 aaKnown RBP18.29■□□□□ 0.52
CTSA-207ENST00000484855 ADORA2AP29274 412 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 HNRNPH3P31942 346 aaKnown RBP18.29■□□□□ 0.52
CTSA-207ENST00000484855 STAT5BP51692 787 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 CDK17Q00537 523 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 CELF3Q5SZQ8 465 aaKnown RBP18.29■□□□□ 0.52
CTSA-207ENST00000484855 CST9Q5W186 159 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 TRIM65Q6PJ69 517 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 AFAP1L1Q8TED9 768 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 TBX20Q9UMR3 447 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 IVNS1ABPQ9Y6Y0 642 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 SIP14410 1827 aa18.29■□□□□ 0.52
CTSA-207ENST00000484855 DENND3A2RUS2 1198 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 TISP43B9A030 160 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 NOL4O94818 638 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 CYLC1P35663 651 aaPredicted RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 HUNKP57058 714 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 SNRPFP62306 86 aaKnown RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 PDXDC1Q6P996 788 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 ARMCX2Q7L311 632 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 MAP4K3Q8IVH8 894 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms