RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-208ENST00000483904 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.33□□□□□ -1.4
NCOA1-208ENST00000483904 STXBP5LQ9Y2K9 1186 aa6.33□□□□□ -1.4
NCOA1-208ENST00000483904 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
NCOA1-208ENST00000483904 DYTNA2CJ06 578 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 WTIPA6NIX2 430 aaPredicted RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 SCDO00767 359 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 GJA4P35212 333 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 BCAR1P56945 870 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 PCBP3P57721 371 aaKnown RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 CT83Q5H943 113 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 TXNRD3Q86VQ6 643 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 CPNE8Q86YQ8 564 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 RSAD2Q8WXG1 361 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 RTF1Q92541 710 aaKnown RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 SLC2A13Q96QE2 648 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 DUSP23Q9BVJ7 150 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 COLEC11Q9BWP8 271 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 TRIT1Q9H3H1 467 aaKnown RBP6.32□□□□□ -1.4
NCOA1-208ENST00000483904 C1GALT1Q9NS00 363 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 RRN3Q9NYV6 651 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 CDC23Q9UJX2 597 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 ZNF281Q9Y2X9 895 aa6.32□□□□□ -1.4
NCOA1-208ENST00000483904 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 SNX2O60749 519 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 CBX7O95931 251 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 CSTBP04080 98 aaKnown RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 SYPP08247 313 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 TNK2Q07912 1038 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 DUSP4Q13115 394 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 LAPTM5Q13571 262 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 SYDE1Q6ZW31 735 aaPredicted RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 UHMK1Q8TAS1 419 aaKnown RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 SH3RF2Q8TEC5 729 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 TRAPPC12Q8WVT3 735 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 UTP4Q969X6 686 aaKnown RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 EIF2AK1Q9BQI3 630 aaKnown RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 IFT122Q9HBG6 1241 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 KIAA1586Q9HCI6 787 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 EVLQ9UI08 416 aaPredicted RBP6.31□□□□□ -1.4
NCOA1-208ENST00000483904 TPCN1Q9ULQ1 816 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 EDARQ9UNE0 448 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 X6R8D5 127 aa6.31□□□□□ -1.4
NCOA1-208ENST00000483904 A0A088AWK7 358 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 PRSS47A8MTI9 375 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 DDX3XO00571 662 aaKnown RBP eCLIP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 KCNK3O14649 394 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 KPNA5O15131 536 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 SLC16A6O15403 523 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 HTRA2O43464 458 aaPredicted RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 MAFKO60675 156 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 DGKIO75912 1065 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 FGF18O76093 207 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 STT3AP46977 705 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 CEBPAP49715 358 aaPredicted RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 ZNF543Q08ER8 600 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 FKBP15Q5T1M5 1219 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 THEMIS2Q5TEJ8 643 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 CPZQ66K79 652 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 CYP4F22Q6NT55 531 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 CCDC62Q6P9F0 684 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 APOA5Q6Q788 366 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 RNF111Q6ZNA4 994 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 C1orf122Q6ZSJ8 110 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 CEP68Q76N32 757 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 FAM214BQ7L5A3 538 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 SUGP1Q8IWZ8 645 aaKnown RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 USHBP1Q8N6Y0 703 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 PPM1NQ8N819 430 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 NSUN6Q8TEA1 469 aaKnown RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 DPF3Q92784 378 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 USP13Q92995 863 aaPredicted RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 LTV1Q96GA3 475 aaPredicted RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 TTLL2Q9BWV7 592 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
NCOA1-208ENST00000483904 UNKQ9C0B0 810 aaKnown RBP6.3□□□□□ -1.4
NCOA1-208ENST00000483904 GOLGA2P5Q9HBQ8 144 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms