RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
ATG4B-220ENST00000482507 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
ATG4B-220ENST00000482507 ZMYM2Q9UBW7 1377 aa16.23■□□□□ 0.19
ATG4B-220ENST00000482507 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 CALUO43852 315 aaPredicted RBP16.22■□□□□ 0.19
ATG4B-220ENST00000482507 GCNT3O95395 438 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 FBXO11Q86XK2 927 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 PIGOQ8TEQ8 1089 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 EIF2AK1Q9BQI3 630 aaKnown RBP16.22■□□□□ 0.19
ATG4B-220ENST00000482507 NEUROG2Q9H2A3 272 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 GCNT4Q9P109 453 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 PCDHB13Q9Y5F0 798 aa16.22■□□□□ 0.19
ATG4B-220ENST00000482507 CES2O00748 559 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 GH2P01242 217 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 MMP14P50281 582 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 TNNC1P63316 161 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 PRKG1Q13976 671 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 C10orf76Q5T2E6 689 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 KSR1Q8IVT5 923 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 CD302Q8IX05 232 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 STXBP5LQ9Y2K9 1186 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 SAMM50Q9Y512 469 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 BZW2Q9Y6E2 419 aaKnown RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 FAM170AA1A519 330 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 BHMG1C9JSJ3 638 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 ITGA4P13612 1032 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 NMT1P30419 496 aaKnown RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 CIITAP33076 1130 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 HSPA9P38646 679 aaKnown RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 GUCY1A3Q02108 690 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 ZC2HC1CQ53FD0 456 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 ACTRT1Q8TDG2 376 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 FAM20AQ96MK3 541 aa16.21■□□□□ 0.19
ATG4B-220ENST00000482507 TAF1DQ9H5J8 278 aaPredicted RBP16.21■□□□□ 0.19
ATG4B-220ENST00000482507 SPDYE3A6NKU9 549 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 CTTNQ14247 550 aaKnown RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 COG2Q14746 738 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 UAP1Q16222 522 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 SYDE2Q5VT97 1194 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 SLFN11Q7Z7L1 901 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 LNX1Q8TBB1 728 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 DDX47Q9H0S4 455 aaKnown RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 ISCUQ9H1K1 167 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 FAM169AQ9Y6X4 670 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 SMCHD1A6NHR9 2005 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 IGLV3-22A0A075B6J6 115 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
ATG4B-220ENST00000482507 GFPT2O94808 682 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 EYA4O95677 639 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 TNFAIP1Q13829 316 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 KDM7AQ6ZMT4 941 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 PBKQ96KB5 322 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 WDR18Q9BV38 432 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 FBXL5Q9UKA1 691 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 PLAAQ9Y263 795 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 RABGAP1Q9Y3P9 1069 aa16.2■□□□□ 0.18
ATG4B-220ENST00000482507 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 SART1O43290 800 aaKnown RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 EPHX2P34913 555 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 FLT3P36888 993 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 OR2W6PQ8NHA6 318 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 ADM5C9JUS6 153 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 H0YGN5 161 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 EBAG9O00559 213 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 TBCAO75347 108 aaKnown RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 FLOT1O75955 427 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 CLSTN1O94985 981 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 GMCL1Q96IK5 515 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 HSD17B14Q9BPX1 270 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 METTL14Q9HCE5 456 aaKnown RBP16.19■□□□□ 0.18
ATG4B-220ENST00000482507 NFS1Q9Y697 457 aa16.19■□□□□ 0.18
ATG4B-220ENST00000482507 IGSF9BQ9UPX0 1349 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 ZEB2O60315 1214 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 H2AFZP0C0S5 128 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 HSD17B3P37058 310 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 HLTFQ14527 1009 aaKnown RBP eCLIP16.18■□□□□ 0.18
ATG4B-220ENST00000482507 EMC10Q5UCC4 262 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 TMEM179Q6ZVK1 233 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 H2AFVQ71UI9 128 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 NT5DC3Q86UY8 548 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 EFCAB13Q8IY85 973 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 SLC30A5Q8TAD4 765 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 ATP6V1G3Q96LB4 118 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 FIZ1Q96SL8 496 aa16.18■□□□□ 0.18
ATG4B-220ENST00000482507 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.186e-7■□□□□ 10.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms