RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ADCY4Q8NFM4 1077 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 DDX11Q96FC9 970 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 HHIPL1Q96JK4 782 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 AGO4Q9HCK5 861 aaKnown RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 RCAN3Q9UKA8 241 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 RLFQ13129 1914 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 DVL2O14641 736 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 TUSC2O75896 110 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 TNFSF4P23510 183 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 BAG6P46379 1132 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 NKG7Q16617 165 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 VPS53Q5VIR6 699 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 OR2W6PQ8NHA6 318 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 MCMBPQ9BTE3 642 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 TTLL2Q9BWV7 592 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 C1orf112Q9NSG2 853 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 NXF1Q9UBU9 619 aaKnown RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 JAG2Q9Y219 1238 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 MAGED1Q9Y5V3 778 aaPredicted RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 RPAP1Q9BWH6 1393 aaPredicted RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 H3BM21 787 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 BAIAP3O94812 1187 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 HSP90AA1P07900 732 aaKnown RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 POU2F2P09086 479 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 HNRNPLP14866 589 aaKnown RBP eCLIP3.93□□□□□ -1.78
SMC6-208ENST00000481708 SCP2P22307 547 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 PRELPP51888 382 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 PMS1P54277 932 aaKnown RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 CDC37Q16543 378 aaPredicted RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 GDF6Q6KF10 455 aaPredicted RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 RETSATQ6NUM9 610 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 ELMSAN1Q6PJG2 1045 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 LMBR1LQ6UX01 489 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 KIAA0319LQ8IZA0 1049 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 KREMEN2Q8NCW0 462 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 NUDT8Q8WV74 236 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 TMEM169Q96HH4 297 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 RSRC1Q96IZ7 334 aaKnown RBP3.93□□□□□ -1.78
SMC6-208ENST00000481708 TBATAQ96M53 351 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 CHCHD6Q9BRQ6 235 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 PRDM12Q9H4Q4 367 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 SLC12A7Q9Y666 1083 aa3.93□□□□□ -1.78
SMC6-208ENST00000481708 PLXNA1Q9UIW2 1896 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 F8W8V4 182 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 XPOTO43592 962 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 POLBP06746 335 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 RAD52P43351 418 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PCSK7Q16549 785 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 STYK1Q6J9G0 422 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 C20orf204Q6ZNR8 217 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 C8orf86Q6ZUL3 223 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CYFIP1Q7L576 1253 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ZSCAN30Q86W11 494 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 TRIM59Q8IWR1 403 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 MYLK2Q9H1R3 596 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ZFYVE1Q9HBF4 777 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CYP26B1Q9NR63 512 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 MBIPQ9NS73 344 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 L1RE1Q9UN81 338 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PCDHGC5Q9Y5F6 944 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ELOA3CA0A087WX78 387 aaPredicted RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 ELOA3DA6NLF2 546 aaPredicted RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 SOX1O00570 391 aaPredicted RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 TMEM127O75204 238 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CLK1P49759 484 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 SCNN1BP51168 640 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 AFF1P51825 1210 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 NR1H2P55055 460 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ELOA3BQ3SY89 546 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 JMJD6Q6NYC1 403 aaPredicted RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 CCDC149Q6ZUS6 474 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 BVESQ8NE79 360 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ELOA3Q8NG57 546 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PLBD2Q8NHP8 589 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 DDX17Q92841 729 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 PPP1R14AQ96A00 147 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 VPS11Q9H270 941 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CCDC86Q9H6F5 360 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 ZCCHC17Q9NP64 241 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 RASSF1Q9NS23 344 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 FRRS1LQ9P0K9 344 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 TPCN1Q9ULQ1 816 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PCDHGB2Q9Y5G2 931 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ACEP12821 1306 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 TTC21BQ7Z4L5 1316 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PQBP1O60828 265 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 SLITRK5O94991 958 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 VSIG8P0DPA2 414 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 EDNRBP24530 442 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 PEX2P28328 305 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CDC25BP30305 580 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 GRM1Q13255 1194 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 AP3B2Q13367 1082 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 DOCK1Q14185 1865 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 RNF152Q8N8N0 203 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 SNRNP27Q8WVK2 155 aaKnown RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 IPCEF1Q8WWN9 437 aaPredicted RBP3.92□□□□□ -1.78
SMC6-208ENST00000481708 SH3KBP1Q96B97 665 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 ATP6V0A4Q9HBG4 840 aa3.92□□□□□ -1.78
SMC6-208ENST00000481708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms