RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 SEPT9Q9UHD8 586 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 TPCN1Q9ULQ1 816 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 LZTS1Q9Y250 596 aa13.64□□□□□ -0.23
SQSTM1-207ENST00000481335 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 GAS2O43903 313 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 EOMESO95936 686 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 IL9P15248 144 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 PPM1AP35813 382 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 HYAL1Q12794 435 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 CAMK1Q14012 370 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 GJD3Q8N144 294 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 POF1BQ8WVV4 589 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 SCLT1Q96NL6 688 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 AIFM3Q96NN9 605 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 CEP89Q96ST8 783 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 POP1Q99575 1024 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 GCOM2Q9BZD3 368 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 ALG13Q9NP73 1137 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
SQSTM1-207ENST00000481335 A0A0U1RQF3 1178 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 H3BQ06 376 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 SLC37A4O43826 429 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 MAFO75444 373 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 P4HBP07237 508 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 SKIP12755 728 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 COL9A1P20849 921 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 SFPQP23246 707 aaKnown RBP eCLIP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 LTBRP36941 435 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 QARSP47897 775 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 AK2P54819 239 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 SMAD4Q13485 552 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 MTERF2Q49AM1 385 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 SPOUT1Q5T280 376 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 ABI1Q8IZP0 508 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 GTF3C6Q969F1 213 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 PPP1R16BQ96T49 567 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 VAV3Q9UKW4 847 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 ARIH1Q9Y4X5 557 aaPredicted RBP13.62□□□□□ -0.23
SQSTM1-207ENST00000481335 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 CCNT1O60563 726 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 GPR37L1O60883 481 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 STBD1O95210 358 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 ALADP13716 330 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 KRT2P35908 639 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 GATMP50440 423 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 ADAM15Q13444 863 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 SMAD2Q15796 467 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 FAM102BQ5T8I3 360 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 ECHDC2Q86YB7 292 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 ADHFE1Q8IWW8 467 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 COLGALT1Q8NBJ5 622 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 SLC7A3Q8WY07 619 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 GJA10Q969M2 543 aa13.61□□□□□ -0.23
SQSTM1-207ENST00000481335 TBX10O75333 385 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 FGF18O76093 207 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 CTDNEP1O95476 244 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 EYA4O95677 639 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 DNAJB1P25685 340 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 RFC5P40937 340 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 RAB27AP51159 221 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 ZP2Q05996 745 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 COASYQ13057 564 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 EPHA7Q15375 998 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 TMEM31Q5JXX7 168 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 EP400NLQ6ZTU2 488 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 ANO5Q75V66 913 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 C4orf19Q8IY42 314 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 THNSL1Q8IYQ7 743 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 CWH43Q9H720 699 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 CYP26B1Q9NR63 512 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 TYW1Q9NV66 732 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 CD207Q9UJ71 328 aa13.6□□□□□ -0.23
SQSTM1-207ENST00000481335 C19orf67A6NJJ6 358 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 EML1O00423 815 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 FSCN2O14926 492 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 MBTPS2O43462 519 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 SRGAP2BP0DMP2 458 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 FGFR1P11362 822 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms