RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 C16orf59Q7L2K0 433 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 ZNF410Q86VK4 478 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 UBE2OQ9C0C9 1292 aaKnown RBP21.94■■□□□ 1.1
LIME1-205ENST00000480139 ADAMTS10Q9H324 1103 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 BLOC1S4Q9NUP1 217 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 STK17AQ9UEE5 414 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 PLA2G4BP0C869 781 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 NLRP11P59045 1033 aaKnown RBP21.93■■□□□ 1.1
LIME1-205ENST00000480139 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
LIME1-205ENST00000480139 LPIN1Q14693 890 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 KIZQ2M2Z5 673 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 PLEKHG4Q58EX7 1191 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 RESP18Q5W5W9 173 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 ADALQ6DHV7 355 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 CCDC73Q6ZRK6 1079 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 TSHZ1Q6ZSZ6 1077 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 DEFB128Q7Z7B8 93 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 TET1Q8NFU7 2136 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 PRPF31Q8WWY3 499 aaKnown RBP21.93■■□□□ 1.1
LIME1-205ENST00000480139 RAD54LQ92698 747 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 TMEM143Q96AN5 459 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 PLIN2Q99541 437 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 TIPINQ9BVW5 301 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 BMP2KQ9NSY1 1161 aaPredicted RBP21.93■■□□□ 1.1
LIME1-205ENST00000480139 COL4A3BPQ9Y5P4 624 aa21.93■■□□□ 1.1
LIME1-205ENST00000480139 ARL2P36404 184 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 SLC12A3P55017 1021 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 TMEM240Q5SV17 173 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 RRAGBQ5VZM2 374 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 CNKSR3Q6P9H4 555 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 CHRDL2Q6WN34 429 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 C1orf186Q6ZWK4 172 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 RHPN2Q8IUC4 686 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 LRRC15Q8TF66 581 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 LARP4BQ92615 738 aaKnown RBP21.92■■□□□ 1.1
LIME1-205ENST00000480139 APBB2Q92870 758 aa21.92■■□□□ 1.1
LIME1-205ENST00000480139 A0A1W2PPC1 479 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 GUCY2CP25092 1073 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 POU5F1BQ06416 359 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 LAMTOR4Q0VGL1 99 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 RINT1Q6NUQ1 792 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 ZNF365Q70YC5 407 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 SEPT8Q92599 483 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.91■■□□□ 1.18e-8■■■□□ 15.1
LIME1-205ENST00000480139 CDHR5Q9HBB8 845 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 FAM13BQ9NYF5 915 aa21.91■■□□□ 1.1
LIME1-205ENST00000480139 BAIAP3O94812 1187 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 FGBP02675 491 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 ACRP10323 421 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 GHRP10912 638 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 ACTN1P12814 892 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 EIF4BP23588 611 aaKnown RBP21.9■■□□□ 1.1
LIME1-205ENST00000480139 CMA1P23946 247 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 NAALADL2Q58DX5 795 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 ODR4Q5SWX8 454 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 TMEM40Q8WWA1 233 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 NLRP7Q8WX94 980 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 HERVK_113Q902F9 699 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 KIFAP3Q92845 792 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 OSMRQ99650 979 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 PYM1Q9BRP8 204 aaKnown RBP21.9■■□□□ 1.1
LIME1-205ENST00000480139 RUSC1Q9BVN2 902 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 IFIH1Q9BYX4 1025 aaKnown RBP21.9■■□□□ 1.1
LIME1-205ENST00000480139 OSBPL7Q9BZF2 842 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 POLR3FQ9H1D9 316 aaPredicted RBP21.9■■□□□ 1.1
LIME1-205ENST00000480139 GINS2Q9Y248 185 aa21.9■■□□□ 1.1
LIME1-205ENST00000480139 A0A087X0B3 334 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 A0A1W2PQ27 194 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 A0A1W2PQ64 194 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 A0A1W2PQD8 194 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 DARSP14868 501 aaKnown RBP21.89■■□□□ 1.09
LIME1-205ENST00000480139 GLRA2P23416 452 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 STAT6P42226 847 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 TFDP1Q14186 410 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 FAM102BQ5T8I3 360 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 RASIP1Q5U651 963 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 TDHQ8IZJ6 230 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 ASAP3Q8TDY4 903 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 SCLT1Q96NL6 688 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 PPP1R16BQ96T49 567 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 NFKBIZQ9BYH8 718 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 GCOM2Q9BZD3 368 aaPredicted RBP21.89■■□□□ 1.09
LIME1-205ENST00000480139 INO80BQ9C086 356 aaPredicted RBP21.89■■□□□ 1.09
LIME1-205ENST00000480139 MTIF3Q9H2K0 278 aaKnown RBP21.89■■□□□ 1.09
LIME1-205ENST00000480139 CUEDC2Q9H467 287 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 MICAL3Q7RTP6 2002 aa21.89■■□□□ 1.09
LIME1-205ENST00000480139 A0A087WZ62 844 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 FAM237AA0A1B0GTK4 181 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 EFCAB14O75071 495 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 RPS6KA5O75582 802 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 SSBP05455 408 aaKnown RBP eCLIP21.88■■□□□ 1.09
LIME1-205ENST00000480139 PAK2Q13177 524 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 MCM6Q14566 821 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 E2F4Q16254 413 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 IFNLR1Q8IU57 520 aaPredicted RBP21.88■■□□□ 1.09
LIME1-205ENST00000480139 KSR1Q8IVT5 923 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 DBF4BQ8NFT6 615 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 DRC1Q96MC2 740 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 NLRP4Q96MN2 994 aa21.88■■□□□ 1.09
LIME1-205ENST00000480139 FDXACB1Q9BRP7 624 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms