RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 MVB12AQ96EY5 273 aa6.55□□□□□ -1.36
UPF3B-203ENST00000478840 PITHD1Q9GZP4 211 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-203ENST00000478840 TMEM60Q9H2L4 133 aa6.55□□□□□ -1.36
UPF3B-203ENST00000478840 C19orf44Q9H6X5 657 aa6.55□□□□□ -1.36
UPF3B-203ENST00000478840 DPP7Q9UHL4 492 aa6.55□□□□□ -1.36
UPF3B-203ENST00000478840 PRSS50Q9UI38 385 aa6.55□□□□□ -1.36
UPF3B-203ENST00000478840 MYPNQ86TC9 1320 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-203ENST00000478840 CREB3O43889 395 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 MAFO75444 373 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-203ENST00000478840 RAC2P15153 192 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 SPIDRQ14159 915 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 CCDC178Q5BJE1 867 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 ZMYM1Q5SVZ6 1142 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 PRAMEF9Q5VWM5 478 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 MYLIPQ8WY64 445 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 TOE1Q96GM8 510 aaKnown RBP6.54□□□□□ -1.36
UPF3B-203ENST00000478840 ARPC5LQ9BPX5 153 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 ELAC2Q9BQ52 826 aaKnown RBP6.54□□□□□ -1.36
UPF3B-203ENST00000478840 AMNQ9BXJ7 453 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 RXFP1Q9HBX9 757 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 CDY2AQ9Y6F7 541 aa6.54□□□□□ -1.36
UPF3B-203ENST00000478840 FAM227AF5H4B4 570 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 DTNBO60941 627 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 APOL3O95236 402 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 MED26O95402 600 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 MC4RP32245 332 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 TRHRP34981 398 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-203ENST00000478840 CD97P48960 835 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 RGS3P49796 1198 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 FXR1P51114 621 aaKnown RBP eCLIP6.53□□□□□ -1.36
UPF3B-203ENST00000478840 MALLQ13021 153 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 C4orf46Q504U0 113 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 TEPPQ6URK8 271 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 TOGARAM2Q6ZUX3 1019 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 PROSER1Q86XN7 944 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 DENND1CQ8IV53 801 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 FLCNQ8NFG4 579 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 CALML6Q8TD86 181 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 RPGRQ92834 1020 aaKnown RBP6.53□□□□□ -1.36
UPF3B-203ENST00000478840 FATE1Q969F0 183 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 GJA10Q969M2 543 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 ACE2Q9BYF1 805 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-203ENST00000478840 KLHL11Q9NVR0 708 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 UCKL1Q9NWZ5 548 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 TAGLN3Q9UI15 199 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 SCOCQ9UIL1 159 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 ADAMTS6Q9UKP5 1117 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 PHTF1Q9UMS5 762 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 YBX2Q9Y2T7 364 aaKnown RBP6.53□□□□□ -1.36
UPF3B-203ENST00000478840 IPPQ9Y573 584 aa6.53□□□□□ -1.36
UPF3B-203ENST00000478840 A0A0A6YYJ9 748 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 ZNF839A8K0R7 811 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 PMM2O15305 246 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 MAFGO15525 162 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 HTRA2O43464 458 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-203ENST00000478840 OPHN1O60890 802 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 MPOP05164 745 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
UPF3B-203ENST00000478840 EDNRBP24530 442 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 MAPKAPK2P49137 400 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
UPF3B-203ENST00000478840 ADRM1Q16186 407 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 PGS1Q32NB8 556 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 UAP1L1Q3KQV9 507 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 RPTNQ6XPR3 784 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 MORC1Q86VD1 984 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 GRAMD1CQ8IYS0 662 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 KIAA0319LQ8IZA0 1049 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 NGRNQ9NPE2 291 aaKnown RBP6.52□□□□□ -1.37
UPF3B-203ENST00000478840 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
UPF3B-203ENST00000478840 GALNT8Q9NY28 637 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
UPF3B-203ENST00000478840 B3GALT2O43825 422 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 CELA3BP08861 270 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 SLC5A1P13866 664 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 FAM193AP78312 1265 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 PRR5P85299 388 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 C10orf62Q5T681 223 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-203ENST00000478840 AMIGO3Q86WK7 504 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 PPM1NQ8N819 430 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 MARCH10Q8NA82 808 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-203ENST00000478840 BTBD2Q9BX70 525 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 NAA15Q9BXJ9 866 aaKnown RBP6.51□□□□□ -1.37
UPF3B-203ENST00000478840 HAPLN2Q9GZV7 340 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 MTG2Q9H4K7 406 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 DBR1Q9UK59 544 aaKnown RBP6.51□□□□□ -1.37
UPF3B-203ENST00000478840 LIMCH1Q9UPQ0 1083 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 FAM50BQ9Y247 325 aa6.51□□□□□ -1.37
UPF3B-203ENST00000478840 UBXN7O94888 489 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
UPF3B-203ENST00000478840 IL12RB1P42701 662 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 ECE1P42892 770 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 TM4SF4P48230 202 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 GALK1P51570 392 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 AGFG1P52594 562 aaKnown RBP6.5□□□□□ -1.37
UPF3B-203ENST00000478840 CDK17Q00537 523 aa6.5□□□□□ -1.37
UPF3B-203ENST00000478840 TMEM62Q0P6H9 643 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms