RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 PDILTQ8N807 584 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 SEPT8Q92599 483 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 LARP4BQ92615 738 aaKnown RBP12.64□□□□□ -0.39
SRRT-211ENST00000478693 RNPC3Q96LT9 517 aaKnown RBP12.64□□□□□ -0.39
SRRT-211ENST00000478693 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
SRRT-211ENST00000478693 XPNPEP1Q9NQW7 623 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 RCOR1Q9UKL0 485 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 COL4A3BPQ9Y5P4 624 aa12.64□□□□□ -0.39
SRRT-211ENST00000478693 ARID2Q68CP9 1835 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 CRYBB1P53674 252 aaPredicted RBP12.63□□□□□ -0.39
SRRT-211ENST00000478693 EPHB4P54760 987 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
SRRT-211ENST00000478693 MCM6Q14566 821 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 FBXO47Q5MNV8 452 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 ODR4Q5SWX8 454 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 CNKSR3Q6P9H4 555 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 TRAF7Q6Q0C0 670 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 ZNF365Q70YC5 407 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 OTOP2Q7RTS6 562 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 GPBP1Q86WP2 473 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 RAD54LQ92698 747 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.393e-11■■■□□ 17.8
SRRT-211ENST00000478693 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
SRRT-211ENST00000478693 GPRC5CQ9NQ84 441 aa12.63□□□□□ -0.39
SRRT-211ENST00000478693 A0A087WZ62 844 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 ASAP2O43150 1006 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 GPR32O75388 356 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 RPS6KA5O75582 802 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 CXCL10P02778 98 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 SRGAP2CP0DJJ0 459 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 CYP11B2P19099 503 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 CD52P31358 61 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 BMP8BP34820 402 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 KCNJ6P48051 423 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 RAD51AP2Q09MP3 1159 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 LAMTOR4Q0VGL1 99 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
SRRT-211ENST00000478693 MXD4Q14582 209 aaPredicted RBP12.62□□□□□ -0.39
SRRT-211ENST00000478693 LPIN1Q14693 890 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 MBTPS1Q14703 1052 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 TMEM240Q5SV17 173 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 ZNF410Q86VK4 478 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 SYT2Q8N9I0 419 aaPredicted RBP12.62□□□□□ -0.39
SRRT-211ENST00000478693 USP38Q8NB14 1042 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 RNF149Q8NC42 400 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 DBF4BQ8NFT6 615 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 ASAP3Q8TDY4 903 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 PRPF31Q8WWY3 499 aaKnown RBP12.62□□□□□ -0.39
SRRT-211ENST00000478693 APBB2Q92870 758 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 IFT74Q96LB3 600 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 DRC1Q96MC2 740 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 FDXACB1Q9BRP7 624 aaPredicted RBP12.62□□□□□ -0.39
SRRT-211ENST00000478693 RUSC1Q9BVN2 902 aa12.62□□□□□ -0.39
SRRT-211ENST00000478693 GPR182O15218 404 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 HIP1RO75146 1068 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 TBCAO75347 108 aaKnown RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 IBSPP21815 317 aaPredicted RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
SRRT-211ENST00000478693 PHKA2P46019 1235 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 SLC12A3P55017 1021 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 CACNB1Q02641 598 aaPredicted RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 IKBKEQ14164 716 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 PPP2R5AQ15172 486 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 SHHQ15465 462 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 PLEKHG4Q58EX7 1191 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 C9orf50Q5SZB4 431 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 AXDND1Q5T1B0 1012 aaPredicted RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 RESP18Q5W5W9 173 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 RINT1Q6NUQ1 792 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 SV2BQ7L1I2 683 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 ZBTB8OSQ8IWT0 167 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 DEPTORQ8TB45 409 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 KIFAP3Q92845 792 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 PYM1Q9BRP8 204 aaKnown RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 TIPINQ9BVW5 301 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 ADAMTS10Q9H324 1103 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 ZHX3Q9H4I2 956 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
SRRT-211ENST00000478693 SQORQ9Y6N5 450 aa12.61□□□□□ -0.39
SRRT-211ENST00000478693 WDR81Q562E7 1941 aa12.6□□□□□ -0.39
SRRT-211ENST00000478693 A0A087X0B3 334 aa12.6□□□□□ -0.39
SRRT-211ENST00000478693 DENND3A2RUS2 1198 aa12.6□□□□□ -0.39
SRRT-211ENST00000478693 BAIAP3O94812 1187 aa12.6□□□□□ -0.39
SRRT-211ENST00000478693 ERLIN2O94905 339 aa12.6□□□□□ -0.39
SRRT-211ENST00000478693 DARSP14868 501 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms