RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 NSMFQ6X4W1 530 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 SLC30A10Q6XR72 485 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 ZNF662Q6ZS27 426 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 OTUD6AQ7L8S5 288 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TMEM139Q8IV31 216 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 SLC9A9Q8IVB4 645 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TPH2Q8IWU9 490 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TXLNBQ8N3L3 684 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 DYDC2Q96IM9 177 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 DRC1Q96MC2 740 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TAAR1Q96RJ0 339 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 DNAJC7Q99615 494 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 MOV10L1Q9BXT6 1211 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 NDST4Q9H3R1 872 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 MROH8Q9H579 483 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TAF1DQ9H5J8 278 aaPredicted RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 TMEM206Q9H813 350 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 ABHD10Q9NUJ1 306 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 TAB2Q9NYJ8 693 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 LARSQ9P2J5 1176 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 MYO1AQ9UBC5 1043 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 CAPN11Q9UMQ6 739 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 LUC7L2Q9Y383 392 aaKnown RBP7.35□□□□□ -1.23
LDB3-206ENST00000477489 PCDHA10Q9Y5I2 948 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 CASP8AP2Q9UKL3 1982 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 LCTP09848 1927 aa7.35□□□□□ -1.23
LDB3-206ENST00000477489 PHLPP2Q6ZVD8 1323 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 GTPBP10A4D1E9 387 aaKnown RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 TMEM88BA6NKF7 163 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 SPATA31C2B4DYI2 1134 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 TRAF5O00463 557 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 MAPK13O15264 365 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 GYPCP04921 128 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 PSAPP07602 524 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 TNNT1P13805 278 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 EIF2AK2P19525 551 aaKnown RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 EDNRBP24530 442 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 GTF2F1P35269 517 aaKnown RBP eCLIP7.34□□□□□ -1.23
LDB3-206ENST00000477489 MCCD1P59942 119 aaPredicted RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 PSMC6P62333 389 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 CYP4A11Q02928 519 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 RBL2Q08999 1139 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 ITGB3BPQ13352 177 aaPredicted RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 TUBB2AQ13885 445 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 SYCP1Q15431 976 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 STXBP2Q15833 593 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 MEA1Q16626 185 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 Q3C1V9 767 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 MIIPQ5JXC2 388 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 E4F1Q66K89 784 aaPredicted RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 HS2ST1Q7LGA3 356 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 TRIM59Q8IWR1 403 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 C12orf56Q8IXR9 622 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 CCDC170Q8IYT3 715 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 IL31RAQ8NI17 732 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 KIF18AQ8NI77 898 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 SYN2Q92777 582 aaPredicted RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 VTI1AQ96AJ9 217 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 TUBB2BQ9BVA1 445 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 TTYH3Q9C0H2 523 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 SPATC1LQ9H0A9 340 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 VPS16Q9H269 839 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 MRPL44Q9H9J2 332 aaKnown RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 A1CFQ9NQ94 594 aaKnown RBP7.34□□□□□ -1.23
LDB3-206ENST00000477489 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 FBXL5Q9UKA1 691 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 MYO6Q9UM54 1294 aa7.34□□□□□ -1.23
LDB3-206ENST00000477489 ARID2Q68CP9 1835 aa7.34□□□□□ -1.24
LDB3-206ENST00000477489 MYH9P35579 1960 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 LRRC37A2A6NM11 1700 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 RASSF10A6NK89 507 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ADM5C9JUS6 153 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CHMP2AO43633 222 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 GDF9O60383 454 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 IPO7O95373 1038 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 KCNA2P16389 499 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 TAL1P17542 331 aaPredicted RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 TRIM21P19474 475 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 RFX1P22670 979 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 NR2F2P24468 414 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ANXA13P27216 316 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CASP14P31944 242 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 YWHABP31946 246 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 KRT9P35527 623 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 RPIAP49247 311 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 RARRES1P49788 294 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 USP46P62068 366 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ETF1P62495 437 aaKnown RBP7.33□□□□□ -1.24
LDB3-206ENST00000477489 HERVK_113P62684 666 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 ADAM9Q13443 819 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 SNAPC2Q13487 334 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 IRF5Q13568 498 aa7.33□□□□□ -1.24
LDB3-206ENST00000477489 CTTNQ14247 550 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms