RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 EPC2Q52LR7 807 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SGO2Q562F6 1265 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SCYL2Q6P3W7 929 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 THNSL1Q8IYQ7 743 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SLC30A5Q8TAD4 765 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 TNFRSF25Q93038 417 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 FMO2Q99518 471 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 GPRC5CQ9NQ84 441 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SART1O43290 800 aaKnown RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 TMEM191BP0C7N4 346 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 ARP10275 920 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 NR1D1P20393 614 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 BAATQ14032 418 aaPredicted RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 DALRD3Q5D0E6 543 aaKnown RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 BEND6Q5SZJ8 279 aaPredicted RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 PPP1R14CQ8TAE6 165 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 PBKQ96KB5 322 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 FAM86B1E9PN63 330 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 CYP26A1O43174 497 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 KLRC4O43908 158 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 AKAP3O75969 853 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 ACSL3O95573 720 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 FAM86B2P0C5J1 330 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 ZKSCAN8Q15776 578 aaPredicted RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 CCNI2Q6ZMN8 369 aaPredicted RBP11.91□□□□□ -0.5
COL27A1-204ENST00000477421 OR2W6PQ8NHA6 318 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 HAUS1Q96CS2 278 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
COL27A1-204ENST00000477421 ATMINO43313 823 aaPredicted RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 LACTBP83111 547 aaPredicted RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 NPY5RQ15761 445 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 RINT1Q6NUQ1 792 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 FRMD5Q7Z6J6 570 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 CCDC63Q8NA47 563 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 TTC16Q8NEE8 873 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 HDAC7Q8WUI4 952 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 NLRP4Q96MN2 994 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 VCPKMTQ9H867 229 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 ANKZF1Q9H8Y5 726 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 PIM2Q9P1W9 311 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 ANAPC7Q9UJX3 599 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 FEM1BQ9UK73 627 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 NOC2LQ9Y3T9 749 aaKnown RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 SSU72P8A0A1W2PR75 194 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 LRRC10BA6NIK2 292 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 LRRIQ3A6PVS8 624 aaPredicted RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 CD2APQ9Y5K6 639 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 TMEM150BA6NC51 233 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 RCCD1A6NED2 376 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 H3BQF6 201 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 FMO5P49326 533 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 EPHA7Q15375 998 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 BSPRYQ5W0U4 402 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 KCNH7Q9NS40 1196 aa11.9□□□□□ -0.5
COL27A1-204ENST00000477421 CNOT8Q9UFF9 292 aaKnown RBP11.9□□□□□ -0.5
COL27A1-204ENST00000477421 ATRNO75882 1429 aa11.9□□□□□ -0.51
COL27A1-204ENST00000477421 POC1B-GALNT4F8VUJ3 575 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 CTNND1O60716 968 aaKnown RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SOX5P35711 763 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 COG2Q14746 738 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 C2CD6Q53TS8 623 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TRAPPC11Q7Z392 1133 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TMEM139Q8IV31 216 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 CELF4Q9BZC1 486 aaKnown RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TRIM6Q9C030 488 aaPredicted RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 MLXIPLQ9NP71 852 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 ZNF233A6NK53 670 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 GIT2Q14161 759 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SYT2Q8N9I0 419 aaPredicted RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 C11orf70Q9BRQ4 267 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 MMTAG2Q9BU76 263 aaKnown RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 L1RE1Q9UN81 338 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SPATA31A6Q5VVP1 1343 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
COL27A1-204ENST00000477421 TTI1O43156 1089 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 CCND2P30279 289 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 ARHGAP25P42331 645 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 CASP5P51878 434 aa11.89□□□□□ -0.51
COL27A1-204ENST00000477421 NBPF9Q3BBW0 867 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms