RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PODXL2Q9NZ53 605 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 MYRFQ9Y2G1 1151 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 KIF13BQ9NQT8 1826 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 ZNF804BA4D1E1 1349 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 KDM2BQ8NHM5 1336 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
NSMCE4A-208ENST00000477289 N4BP2Q86UW6 1770 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 MYH3P11055 1940 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 CBFA2T2O43439 604 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 PDE8BO95263 885 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 DBHP09172 617 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 IFIT2P09913 472 aaKnown RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 IFNGR1P15260 489 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 IRX6P78412 446 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 GPSM2P81274 684 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 ZNF200P98182 395 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 NR1I3Q14994 352 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 ATP2B3Q16720 1220 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 C9orf131Q5VYM1 1079 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 ZC3H14Q6PJT7 736 aaKnown RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 C16orf71Q8IYS4 520 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 LINC01356Q8N9X3 169 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 TBC1D16Q8TBP0 767 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 SSH3Q8TE77 659 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 LPIN2Q92539 896 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 GCC1Q96CN9 775 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 COA1Q9GZY4 146 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 ZNF277Q9NRM2 450 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 ZNF214Q9UL59 606 aaPredicted RBP5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 LAMB2P55268 1798 aa5.47□□□□□ -1.53
NSMCE4A-208ENST00000477289 DDX60Q8IY21 1712 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 ANKRD31Q8N7Z5 1873 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PNMA6EA0A0J9YXQ4 647 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 FFAR3O14843 346 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PRICKLE3O43900 615 aaPredicted RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 TAF5LO75529 589 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 CYBBP04839 570 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 HIBADHP31937 336 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 LIMS1P48059 325 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 KIAA2012Q0VF49 1180 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 RTP5Q14D33 572 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 TTC39AQ5SRH9 613 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 TMCO4Q5TGY1 634 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 FBXW10Q5XX13 1052 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PAQR3Q6TCH7 311 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 HHIPL2Q6UWX4 724 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 CYP2R1Q6VVX0 501 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 JAMLQ86YT9 394 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 ZGPATQ8N5A5 531 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 EXOC6Q8TAG9 804 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 KAZALD1Q96I82 304 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 CCDC136Q96JN2 1154 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PTCHD1Q96NR3 888 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 GPR20Q99678 358 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 RTFDC1Q9BY42 306 aaPredicted RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 LRRCC1Q9C099 1032 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 NOL6Q9H6R4 1146 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PDLIM7Q9NR12 457 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 DDX41Q9UJV9 622 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 HDAC9Q9UKV0 1011 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 PA2G4Q9UQ80 394 aaKnown RBP5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 EXOC6BQ9Y2D4 811 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 RIPOR2Q9Y4F9 1068 aa5.46□□□□□ -1.54
NSMCE4A-208ENST00000477289 MED23Q9ULK4 1368 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 DLEC1Q9Y238 1755 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 TNRC6CQ9HCJ0 1690 aaKnown RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 A0A1W2PQ27 194 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 A0A1W2PQ64 194 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 A0A1W2PQC6 194 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 A0A1W2PQD8 194 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 IQCA1LA6NCM1 817 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 AKAP8O43823 692 aaKnown RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 ECE2O60344 883 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 UQCRFS1P1P0C7P4 283 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 YY1P25490 414 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 RFX5P48382 616 aaPredicted RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 MMP14P50281 582 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 TFCP2Q12800 502 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 LRRC24Q50LG9 513 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 SPTY2D1Q68D10 685 aaPredicted RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 AACSQ86V21 672 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 KLHDC4Q8TBB5 520 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 TBC1D22AQ8WUA7 517 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 MCMBPQ9BTE3 642 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 PUS3Q9BZE2 481 aaKnown RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 GPR108Q9NPR9 543 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 GINM1Q9NU53 330 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 POLLQ9UGP5 575 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 DENND2AQ9ULE3 1009 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 NOP58Q9Y2X3 529 aaKnown RBP5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 MYO3BQ8WXR4 1341 aa5.45□□□□□ -1.54
NSMCE4A-208ENST00000477289 SLX4Q8IY92 1834 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 ARFGEF1Q9Y6D6 1849 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 A0A1B0GUL7 405 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 H7C1D1 291 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 ERC2O15083 957 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 SUV39H1O43463 412 aa5.44□□□□□ -1.54
NSMCE4A-208ENST00000477289 CD3EP07766 207 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms