RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KRT15P19012 456 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 JAM2P57087 298 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 NAIF1Q69YI7 327 aaPredicted RBP4.33□□□□□ -1.72
XRN1-211ENST00000477237 EEPD1Q7L9B9 569 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 ZC3H7AQ8IWR0 971 aaKnown RBP4.33□□□□□ -1.72
XRN1-211ENST00000477237 MDGA1Q8NFP4 955 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 C16orf92Q96LL3 132 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 IL23AQ9NPF7 189 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 CATSPERZQ9NTU4 200 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 INPP5FQ9Y2H2 1132 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 TTBK1Q5TCY1 1321 aaPredicted RBP4.32□□□□□ -1.72
XRN1-211ENST00000477237 GOLGA8BA8MQT2 603 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 MFAP3LO75121 409 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 GJB6O95452 261 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 PTTG1IPP53801 180 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 HDLBPQ00341 1268 aaKnown RBP4.32□□□□□ -1.72
XRN1-211ENST00000477237 HSP90AA2PQ14568 343 aaPredicted RBP4.32□□□□□ -1.72
XRN1-211ENST00000477237 FXNQ16595 210 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 PRR16Q569H4 304 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 SUPT20HQ8NEM7 779 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 GCDHQ92947 438 aaPredicted RBP4.32□□□□□ -1.72
XRN1-211ENST00000477237 ACBD3Q9H3P7 528 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 SERHL2Q9H4I8 314 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 MAGEL2Q9UJ55 1249 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 CBLCQ9ULV8 474 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 INSL6Q9Y581 213 aa4.32□□□□□ -1.72
XRN1-211ENST00000477237 PRAMEF22A3QJZ6 481 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 WNT9AO14904 365 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 CLASP2O75122 1294 aaKnown RBP4.31□□□□□ -1.72
XRN1-211ENST00000477237 H2AFYO75367 372 aaKnown RBP4.31□□□□□ -1.72
XRN1-211ENST00000477237 PYGMP11217 842 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 FGFR1P11362 822 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 PABPC1P11940 636 aaKnown RBP4.31□□□□□ -1.72
XRN1-211ENST00000477237 LAG3P18627 525 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 USP14P54578 494 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 FOXF2Q12947 444 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 PAK1Q13153 545 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 TCIRG1Q13488 830 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 MFSD5Q6N075 450 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 EP400NLQ6ZTU2 488 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 MAMDC2Q7Z304 686 aaPredicted RBP4.31□□□□□ -1.72
XRN1-211ENST00000477237 ASB15Q8WXK1 588 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 ZNF512Q96ME7 567 aaPredicted RBP4.31□□□□□ -1.72
XRN1-211ENST00000477237 BRIP1Q9BX63 1249 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 WDR11Q9BZH6 1224 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 SYBUQ9NX95 663 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 ANKFY1Q9P2R3 1169 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 TRAF6Q9Y4K3 522 aa4.31□□□□□ -1.72
XRN1-211ENST00000477237 ZNF561-AS1K7EIQ3 104 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 MAFO75444 373 aaPredicted RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 SCAF4O95104 1147 aaKnown RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 SSBP05455 408 aaKnown RBP eCLIP4.3□□□□□ -1.72
XRN1-211ENST00000477237 SESN2P58004 480 aaPredicted RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 MAPK7Q13164 816 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 TNNI3KQ59H18 835 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 TMCO4Q5TGY1 634 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 NSMFQ6X4W1 530 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 BOLLQ8N9W6 283 aaKnown RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 FBXW5Q969U6 566 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 AARSD1Q9BTE6 412 aaKnown RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 LRFN3Q9BTN0 628 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 SMURF1Q9HCE7 757 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 ARHGEF4Q9NR80 690 aa4.3□□□□□ -1.72
XRN1-211ENST00000477237 EPN1Q9Y6I3 576 aaPredicted RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 ARHGEF17Q96PE2 2063 aaPredicted RBP4.3□□□□□ -1.72
XRN1-211ENST00000477237 IPO13O94829 963 aaKnown RBP4.29□□□□□ -1.72
XRN1-211ENST00000477237 APEX1P27695 318 aaKnown RBP4.29□□□□□ -1.72
XRN1-211ENST00000477237 MAP3K12Q12852 859 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 CCDC62Q6P9F0 684 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 SIMC1Q8NDZ2 872 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 PCDH19Q8TAB3 1148 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 SMG7Q92540 1137 aaKnown RBP4.29□□□□□ -1.72
XRN1-211ENST00000477237 NELL1Q92832 810 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 GFM2Q969S9 779 aaKnown RBP4.29□□□□□ -1.72
XRN1-211ENST00000477237 MYEOVQ96EZ4 313 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 GBP4Q96PP9 640 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 RCAN3Q9UKA8 241 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 DENND2AQ9ULE3 1009 aa4.29□□□□□ -1.72
XRN1-211ENST00000477237 DNAJC9-AS1A6NH13 148 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 RASSF10A6NK89 507 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 AHRRA9YTQ3 701 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 IKBKBO14920 756 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 TRIM24O15164 1050 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 ONECUT2O95948 504 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 C1RP00736 705 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 HK1P19367 917 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 ANTXR2P58335 489 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 FAM189BP81408 668 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 FOXI1Q12951 378 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 DCAF17Q5H9S7 520 aaPredicted RBP4.28□□□□□ -1.72
XRN1-211ENST00000477237 C16orf59Q7L2K0 433 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 ZNF366Q8N895 744 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 HIPK4Q8NE63 616 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 ANKS1AQ92625 1134 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 SPATA5L1Q9BVQ7 753 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 CCSER2Q9H7U1 834 aa4.28□□□□□ -1.72
XRN1-211ENST00000477237 SAE1Q9UBE0 346 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms