RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 DGAT1O75907 488 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 RARRES1P49788 294 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 ARL6IP4Q66PJ3 421 aaKnown RBP14.98□□□□□ -0.01
ACTN4-205ENST00000477174 SLC24A5Q71RS6 500 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 FAM228AQ86W67 206 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 CRIPAKQ8N1N5 446 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
ACTN4-205ENST00000477174 PRPF31Q8WWY3 499 aaKnown RBP14.98□□□□□ -0.01
ACTN4-205ENST00000477174 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
ACTN4-205ENST00000477174 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 RGS18Q9NS28 235 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 C1orf112Q9NSG2 853 aa14.98□□□□□ -0.01
ACTN4-205ENST00000477174 DBR1Q9UK59 544 aaKnown RBP14.98□□□□□ -0.01
ACTN4-205ENST00000477174 COL6A3P12111 3177 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 A0A087WZ62 844 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 DENND3A2RUS2 1198 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 LCHNA4D1U4 455 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 MED24O75448 989 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 PDIA4P13667 645 aaKnown RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 FAM189BP81408 668 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 ATP2C1P98194 919 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 MXD4Q14582 209 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 EMC2Q15006 297 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 PIGOQ8TEQ8 1089 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 LINC01599Q8WXQ3 324 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 MYLIPQ8WY64 445 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 CCDC43Q96MW1 224 aaKnown RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 GAS2L1Q99501 681 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 MTRQ99707 1265 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 ADAM2Q99965 735 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 FDXACB1Q9BRP7 624 aaPredicted RBP14.97□□□□□ -0.01
ACTN4-205ENST00000477174 PRDM12Q9H4Q4 367 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 COL4A3BPQ9Y5P4 624 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 EVPLQ92817 2033 aa14.97□□□□□ -0.01
ACTN4-205ENST00000477174 LINC01553A4QN01 128 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 DGKIO75912 1065 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 BMP15O95972 392 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 FOSL2P15408 326 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 ZSCAN20P17040 1043 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 CCT6AP40227 531 aaKnown RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 SARSP49591 514 aaKnown RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 ERVK-21P61565 698 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 MYO9BQ13459 2157 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 DSC3Q14574 896 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 IL17AQ16552 155 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 KRT79Q5XKE5 535 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 FERMT3Q86UX7 667 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 NPAS4Q8IUM7 802 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 TGS1Q96RS0 853 aaKnown RBP14.96□□□□□ -0.01
ACTN4-205ENST00000477174 ATP6V0A4Q9HBG4 840 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 CHST12Q9NRB3 414 aa14.96□□□□□ -0.01
ACTN4-205ENST00000477174 CDH23Q9H251 3354 aa14.96□□□□□ -0.02
ACTN4-205ENST00000477174 WDR81Q562E7 1941 aa14.96□□□□□ -0.02
ACTN4-205ENST00000477174 A0A087WWV3 80 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 C9IYK1 514 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 MGEA5O60502 916 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 ARHGEF15O94989 841 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 SFPQP23246 707 aaKnown RBP eCLIP14.95□□□□□ -0.02
ACTN4-205ENST00000477174 ARL2P36404 184 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 POTEGQ6S5H5 508 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 SRGAP1Q7Z6B7 1085 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 KSR1Q8IVT5 923 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 KCTD17Q8N5Z5 321 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 ARNTL2Q8WYA1 636 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 ZNF689Q96CS4 500 aaPredicted RBP14.95□□□□□ -0.02
ACTN4-205ENST00000477174 NLRP4Q96MN2 994 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 ELAC1Q9H777 363 aaKnown RBP14.95□□□□□ -0.02
ACTN4-205ENST00000477174 IFT122Q9HBG6 1241 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 XPNPEP1Q9NQW7 623 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 PCDHB7Q9Y5E2 793 aa14.95□□□□□ -0.02
ACTN4-205ENST00000477174 STX6O43752 255 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 CSDE1O75534 798 aaKnown RBP14.94□□□□□ -0.02
ACTN4-205ENST00000477174 HSP90AA1P07900 732 aaKnown RBP14.94□□□□□ -0.02
ACTN4-205ENST00000477174 SRGAP2CP0DJJ0 459 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 POU3F3P20264 500 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-205ENST00000477174 TFDP1Q14186 410 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 PCBP1Q15365 356 aaKnown RBP eCLIP14.94□□□□□ -0.026e-23■■■■□ 20.7
ACTN4-205ENST00000477174 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 MCPH1Q8NEM0 835 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 SNX29Q8TEQ0 813 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 TRAIPQ9BWF2 469 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 ZSCAN16Q9H4T2 348 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-205ENST00000477174 CERS4Q9HA82 394 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 DACT1Q9NYF0 836 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 KIAA1024Q9UPX6 916 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 DNM3Q9UQ16 869 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
ACTN4-205ENST00000477174 TTC3P53804 2025 aa14.93□□□□□ -0.02
ACTN4-205ENST00000477174 A0A0U1RQF3 1178 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms