RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NYXQ9GZU5 481 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 TBC1D7Q9P0N9 293 aa9.11□□□□□ -0.95
VAPB-205ENST00000476395 ZMYND8Q9ULU4 1186 aaPredicted RBP9.11□□□□□ -0.95
VAPB-205ENST00000476395 BTNL10A8MVZ5 291 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 HMGB1P1B2RPK0 211 aaPredicted RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 EVI5O60447 810 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SHMT1P34896 483 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 JAM2P57087 298 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 POU5F1Q01860 360 aaKnown RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 PTK2Q05397 1052 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 DRP2Q13474 957 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SPA17Q15506 151 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 CCDC84Q86UT8 332 aaPredicted RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 TBC1D5Q92609 795 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SYT11Q9BT88 431 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 AP1M1Q9BXS5 423 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 ZMYM2Q9UBW7 1377 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SLX4Q8IY92 1834 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SCN9AQ15858 1988 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 DPPA5A6NC42 116 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SERPING1P05155 500 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 SPATA31C1P0DKV0 1188 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 STAT3P40763 770 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 POLR2FP61218 127 aaKnown RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 GKAP1Q5VSY0 366 aaPredicted RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 SIAH1Q8IUQ4 282 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 USP38Q8NB14 1042 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 LSM14BQ9BX40 385 aaKnown RBP9.1□□□□□ -0.95
VAPB-205ENST00000476395 GPR88Q9GZN0 384 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 FBXL5Q9UKA1 691 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 DAGLAQ9Y4D2 1042 aa9.1□□□□□ -0.95
VAPB-205ENST00000476395 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 POTECB2RU33 542 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 GNPATO15228 680 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 CTNND1O60716 968 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 DNAJC8O75937 253 aaPredicted RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 PDHA1P08559 390 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 GNAT1P11488 350 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 SLC9A1P19634 815 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 IFNAR2P48551 515 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 RWDD2BP57060 319 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 AMPD3Q01432 767 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 FAM133AQ8N9E0 248 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 ETNPPLQ8TBG4 499 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 CALML4Q96GE6 196 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 ELAC2Q9BQ52 826 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 EPB41L4BQ9H329 900 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 NR2E1Q9Y466 385 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 CCT8L1PA6NM43 557 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 AKR1B10O60218 316 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 TAL1P17542 331 aaPredicted RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 HSPA9P38646 679 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 ADCY7P51828 1080 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 PPP2R2AP63151 447 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 KCNA1Q09470 495 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 DCAF12L1Q5VU92 463 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 SLFN11Q7Z7L1 901 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 CCDC50Q8IVM0 306 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 MYOCDQ8IZQ8 938 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 UHMK1Q8TAS1 419 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 SEC14L1Q92503 715 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 TRIM31Q9BZY9 425 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 ADAMTS1Q9UHI8 967 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 SUGT1Q9Y2Z0 365 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 USP17L10C9JJH3 530 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 USO1O60763 962 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 KRT16P08779 473 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 SLC16A2P36021 539 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 CTCFP49711 727 aaPredicted RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 FKBP3Q00688 224 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 RBBP5Q15291 538 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 PRR5LQ6MZQ0 368 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 C1orf131Q8NDD1 294 aaKnown RBP9.09□□□□□ -0.95
VAPB-205ENST00000476395 NOX5Q96PH1 765 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 TXLNGYQ9BZA5 131 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
VAPB-205ENST00000476395 ASTN1O14525 1302 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 ANKRD62A6NC57 917 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 C5orf60A6NFR6 353 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 GOLGA6L10A6NI86 522 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 MEIS2O14770 477 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 COQ9O75208 318 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 UBOX5O94941 541 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 TPTE2Q6XPS3 522 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 KSR1Q8IVT5 923 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 ZFPM1Q8IX07 1006 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 NELFCDQ8IXH7 590 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 LRRC34Q8IZ02 419 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 MXD3Q9BW11 206 aa9.08□□□□□ -0.96
VAPB-205ENST00000476395 OSBPL1AQ9BXW6 950 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms