RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SMCO2A6NFE2 343 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 LRRC53A6NM62 1247 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 BTBD19C9JJ37 291 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 HRO43593 1189 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 OPA1O60313 960 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 BAG3O95817 575 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 GNRH1P01148 92 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SERPING1P05155 500 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 GCFC2P16383 781 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 INPP5BP32019 993 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 MAGEA1P43355 309 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 MTIF2P46199 727 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 CDK8P49336 464 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 LSM11P83369 360 aaKnown RBP eCLIP7.53□□□□□ -1.2
UBR4-212ENST00000475973 FKBP3Q00688 224 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 POU5F1Q01860 360 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 TCEAL1Q15170 157 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SPA17Q15506 151 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 CDC37Q16543 378 aaPredicted RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 SLC18A3Q16572 532 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 NFIL3Q16649 462 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 BMT2Q1RMZ1 405 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 EDRF1Q3B7T1 1238 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SPDYCQ5MJ68 293 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 C6orf89Q6UWU4 347 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 LRIG3Q6UXM1 1119 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 EPM2AIP1Q7L775 607 aaPredicted RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 KCNK18Q7Z418 384 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 IRF2BP2Q7Z5L9 587 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 RETREG3Q86VR2 466 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 SCYL3Q8IZE3 742 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 RASGEF1CQ8N431 466 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 LRRC57Q8N9N7 239 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 FAM76AQ8TAV0 307 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 ACTRT1Q8TDG2 376 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 TBCKQ8TEA7 893 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 TMEM174Q8WUU8 243 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 PPM1EQ8WY54 764 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 RIN2Q8WYP3 895 aaPredicted RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 HAS1Q92839 578 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 DYNLL2Q96FJ2 89 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 LRCH3Q96II8 777 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SYT11Q9BT88 431 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 IFIH1Q9BYX4 1025 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 MLXIPQ9HAP2 919 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 ZNF287Q9HBT7 754 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 KCNMB3Q9NPA1 279 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
UBR4-212ENST00000475973 ZNF112Q9UJU3 913 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 KCNH4Q9UQ05 1017 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 TRAF3IP3Q9Y228 551 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 STXBP5LQ9Y2K9 1186 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 SLC27A5Q9Y2P5 690 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 PTPN22Q9Y2R2 807 aa7.53□□□□□ -1.2
UBR4-212ENST00000475973 ZNF536O15090 1300 aa7.52□□□□□ -1.2
UBR4-212ENST00000475973 ATRNL1Q5VV63 1379 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 A0A0A6YYK5 440 aaPredicted RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 GOLGA6CA6NDK9 693 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 C5orf60A6NFR6 353 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ZNF233A6NK53 670 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 CXCL11O14625 94 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 GFPT2O94808 682 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 FSBPO95073 299 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 IPO7O95373 1038 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 MOCS3O95396 460 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 GLI1P08151 1106 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 PAEPP09466 180 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 GOLGA6DP0CG33 693 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 PDHBP11177 359 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 PRMT2P55345 433 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 NPEPPSP55786 919 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ASIC1P78348 528 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 C2orf54Q08AI8 447 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ECM1Q16610 540 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 Q3C1V9 767 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 PUS10Q3MIT2 529 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 SLC9C1Q4G0N8 1177 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ASPRV1Q53RT3 343 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 FAM83BQ5T0W9 1011 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 DESI1Q6ICB0 168 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBR4-212ENST00000475973 TADA2BQ86TJ2 420 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ZNF444Q8N0Y2 327 aaPredicted RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 SMCR8Q8TEV9 937 aaPredicted RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ARL8AQ96BM9 186 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 ARMC5Q96C12 935 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 CALML4Q96GE6 196 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 BORCS6Q96GS4 357 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 NOX5Q96PH1 765 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 NAP1L4Q99733 375 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 NUDT12Q9BQG2 462 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 TXLNGYQ9BZA5 131 aa7.52□□□□□ -1.21
UBR4-212ENST00000475973 RBM12Q9NTZ6 932 aaKnown RBP7.52□□□□□ -1.21
UBR4-212ENST00000475973 GOLGA6AQ9NYA3 693 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms