RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 FECHP22830 423 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 NPTX2P47972 431 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ZBED6P86452 979 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 HSDL1Q3SXM5 330 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 CST9Q5W186 159 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 MIS18BP1Q6P0N0 1132 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 HS2ST1Q7LGA3 356 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 TMTC1Q8IUR5 882 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 LRRN4CLQ8ND94 238 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 NEK11Q8NG66 645 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 BAP1Q92560 729 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 SLC35C1Q96A29 364 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 STRA6Q9BX79 667 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ZNF302Q9NR11 478 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 EPN1Q9Y6I3 576 aaPredicted RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 DOCK3Q8IZD9 2030 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ANKRD63C9JTQ0 380 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 EXOC3O60645 756 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 LRRN2O75325 713 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 NDUFA10O95299 355 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 GNA14O95837 355 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 SLC25A27O95847 323 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 RPL13P26373 211 aaKnown RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 ICAM3P32942 547 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 MARSP56192 900 aaKnown RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 ETF1P62495 437 aaKnown RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 DLG4P78352 724 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 FOXR2Q6PJQ5 311 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 CACNA2D4Q7Z3S7 1137 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 MYRIPQ8NFW9 859 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 NAA15Q9BXJ9 866 aaKnown RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 NHEJ1Q9H9Q4 299 aaPredicted RBP6.83□□□□□ -1.32
CLK1-210ENST00000473565 MLXIPQ9HAP2 919 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
CLK1-210ENST00000473565 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 DNAJC25-GNG10A0A024R161 153 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 DENND3A2RUS2 1198 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 RCCD1A6NED2 376 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 STAM2O75886 525 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 AFPP02771 609 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 DRP2Q13474 957 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 TSR1Q2NL82 804 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 FRMD5Q7Z6J6 570 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 C2orf69Q8N8R5 385 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 TMEM161BQ8NDZ6 487 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 GPRC5AQ8NFJ5 357 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 RDM1Q8NG50 284 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 KIF18AQ8NI77 898 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ELMO3Q96BJ8 720 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 SAAL1Q96ER3 474 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ZNF668Q96K58 619 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 DRC1Q96MC2 740 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 NUP58Q9BVL2 599 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 POLR3FQ9H1D9 316 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 DDX41Q9UJV9 622 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 ZNF263O14978 683 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 TLR2O60603 784 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 TFRCP02786 760 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 OATP04181 439 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 CETPP11597 493 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ADORA2AP29274 412 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ARHGAP25P42331 645 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 HUNKP57058 714 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 EMC2Q15006 297 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 CBWD6Q4V339 395 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 CBWD3Q5JTY5 395 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 CBWD5Q5RIA9 395 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 SPRYD7Q5W111 196 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 STXBP4Q6ZWJ1 553 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 OTUD6AQ7L8S5 288 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 DNAAF5Q86Y56 855 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 TRAPPC12Q8WVT3 735 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 BORCS6Q96GS4 357 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PRIMPOLQ96LW4 560 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 KMT5AQ9NQR1 393 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 FHOD1Q9Y613 1164 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PLXNB2O15031 1838 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PSMC2P35998 433 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 EIF4A3P38919 411 aaKnown RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 GTF2A2P52657 109 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 POLGP54098 1239 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 DMP1Q13316 513 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 RAPGEF1Q13905 1077 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 MEA1Q16626 185 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 XKR3Q5GH77 459 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PDXDC1Q6P996 788 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ZNF397Q8NF99 534 aaPredicted RBP6.82□□□□□ -1.32
CLK1-210ENST00000473565 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 PPP1R13LQ8WUF5 828 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 GLG1Q92896 1179 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 ACCSQ96QU6 501 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 LACRTQ9GZZ8 138 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 GANQ9H2C0 597 aa6.82□□□□□ -1.32
CLK1-210ENST00000473565 MROH8Q9H579 483 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms