RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ANGPT1Q15389 498 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 CEP55Q53EZ4 464 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 WWC2Q6AWC2 1192 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 TMTC3Q6ZXV5 915 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 SLC24A5Q71RS6 500 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 CCDC60Q8IWA6 550 aaPredicted RBP10.64□□□□□ -0.71
VCL-204ENST00000472585 FANCBQ8NB91 859 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 RASGRP4Q8TDF6 673 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 CASP10Q92851 521 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 CASD1Q96PB1 797 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 AZI2Q9H6S1 392 aa10.64□□□□□ -0.71
VCL-204ENST00000472585 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
VCL-204ENST00000472585 SPDYE3A6NKU9 549 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 FAM86B1E9PN63 330 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 DDX39AO00148 427 aaKnown RBP10.63□□□□□ -0.71
VCL-204ENST00000472585 ASGR2P07307 311 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 FAM86B2P0C5J1 330 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 MTHFRP42898 656 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 PLCB3Q01970 1234 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 KIZQ2M2Z5 673 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 HEATR3Q7Z4Q2 680 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 CCDC105Q8IYK2 499 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 TDRD5Q8NAT2 981 aaKnown RBP10.63□□□□□ -0.71
VCL-204ENST00000472585 CRYGNQ8WXF5 182 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 CNTNAP3BQ96NU0 1288 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 TCF25Q9BQ70 676 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 RTP3Q9BQQ7 232 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 CNTNAP3Q9BZ76 1288 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 LSG1Q9H089 658 aaKnown RBP10.63□□□□□ -0.71
VCL-204ENST00000472585 POMKQ9H5K3 350 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
VCL-204ENST00000472585 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 LZTS1Q9Y250 596 aa10.63□□□□□ -0.71
VCL-204ENST00000472585 SLC27A2O14975 620 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 EDIL3O43854 480 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 C22orf31O95567 290 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 VTNP04004 478 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 WEE2P0C1S8 567 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 LAG3P18627 525 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 AOC1P19801 751 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 LIFRP42702 1097 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
VCL-204ENST00000472585 GNAQP50148 359 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 KRT17Q04695 432 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 NECTIN1Q15223 517 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 DTWD2Q8NBA8 298 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 MRPS27Q92552 414 aaKnown RBP10.62□□□□□ -0.71
VCL-204ENST00000472585 TNPO1Q92973 898 aaKnown RBP10.62□□□□□ -0.71
VCL-204ENST00000472585 OSMRQ99650 979 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 MTA3Q9BTC8 594 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 ADAM7Q9H2U9 754 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
VCL-204ENST00000472585 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 DBR1Q9UK59 544 aaKnown RBP10.62□□□□□ -0.71
VCL-204ENST00000472585 FBXL21Q9UKT6 434 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 SPTBN2O15020 2390 aa10.62□□□□□ -0.71
VCL-204ENST00000472585 CNTNAP5Q8WYK1 1306 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 IGLV3-22A0A075B6J6 115 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 DENND3A2RUS2 1198 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 HBP1O60381 514 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 RFX1P22670 979 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 MCM5P33992 734 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 CA8P35219 290 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 CRYBB1P53674 252 aaPredicted RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 BMS1Q14692 1282 aaKnown RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 CLLU1OSQ5K130 101 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 CWF19L1Q69YN2 538 aaKnown RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 CASC1Q6TDU7 716 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 KCNT2Q6UVM3 1135 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 TRMT1LQ7Z2T5 733 aaKnown RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 ZDHHC14Q8IZN3 488 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 TMTC2Q8N394 836 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 LINC01465Q8N7H1 131 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 C12orf76Q8N812 135 aaPredicted RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 TMEM87BQ96K49 555 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 SDF4Q9BRK5 362 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 ANO3Q9BYT9 981 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 ADAMTS10Q9H324 1103 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 ATP6V0A4Q9HBG4 840 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 C1orf112Q9NSG2 853 aa10.61□□□□□ -0.71
VCL-204ENST00000472585 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
VCL-204ENST00000472585 SMCO2A6NFE2 343 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 C2orf71A6NGG8 1288 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 NT5C1B-RDH14C9J2C7 533 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 GPR182O15218 404 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 PI15O43692 258 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 CLASP2O75122 1294 aaKnown RBP10.6□□□□□ -0.71
VCL-204ENST00000472585 SREBF1P36956 1147 aa10.6□□□□□ -0.71
VCL-204ENST00000472585 SLC26A2P50443 739 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms