RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FAM49AQ9H0Q0 323 aaPredicted RBP18.67■□□□□ 0.58
CCM2-205ENST00000472223 CLSTN2Q9H4D0 955 aa18.67■□□□□ 0.58
CCM2-205ENST00000472223 RMND1Q9NWS8 449 aa18.67■□□□□ 0.58
CCM2-205ENST00000472223 ATP11BQ9Y2G3 1177 aa18.67■□□□□ 0.58
CCM2-205ENST00000472223 EVPLQ92817 2033 aa18.67■□□□□ 0.58
CCM2-205ENST00000472223 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 PVALEFA0A1B0GWK0 134 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 TRAK2O60296 914 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 SOX10P56693 466 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 ADAM17P78536 824 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 ZNF200P98182 395 aaPredicted RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 DMP1Q13316 513 aaPredicted RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 BFSP2Q13515 415 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 GIT2Q14161 759 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 CAMK4Q16566 473 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 ARSHQ5FYA8 562 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 GRAMD1CQ8IYS0 662 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 LRRC15Q8TF66 581 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 CEP89Q96ST8 783 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 REEP2Q9BRK0 252 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 HTATIP2Q9BUP3 242 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 GTPBP4Q9BZE4 634 aaKnown RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 POLR3FQ9H1D9 316 aaPredicted RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 BLZF1Q9H2G9 400 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 PDLIM7Q9NR12 457 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 TRMT13Q9NUP7 481 aaKnown RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 PANK4Q9NVE7 773 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 MYH11P35749 1972 aa18.66■□□□□ 0.58
CCM2-205ENST00000472223 TRIP12Q14669 1992 aaPredicted RBP18.66■□□□□ 0.58
CCM2-205ENST00000472223 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 H0YCG3 227 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 B4GALT4O60513 344 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 CLCN3P51790 818 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 RTP1P59025 263 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 CUL4BQ13620 913 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 HERC4Q5GLZ8 1057 aaPredicted RBP18.65■□□□□ 0.58
CCM2-205ENST00000472223 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 SH3RF1Q7Z6J0 888 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 SERINC5Q86VE9 423 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 RHPN2Q8IUC4 686 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 DNAJB3Q8WWF6 145 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 PRPF31Q8WWY3 499 aaKnown RBP18.65■□□□□ 0.58
CCM2-205ENST00000472223 TRPV6Q9H1D0 765 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 EXOC1Q9NV70 894 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 SEL1LQ9UBV2 794 aa18.65■□□□□ 0.58
CCM2-205ENST00000472223 CCDC169A6NNP5 214 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 CAND2O75155 1236 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 LETM1O95202 739 aaPredicted RBP18.64■□□□□ 0.57
CCM2-205ENST00000472223 ABCD1P33897 745 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 THPOP40225 353 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
CCM2-205ENST00000472223 PNOCQ13519 176 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 SNX17Q15036 470 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 TRIM60Q495X7 471 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 ODR4Q5SWX8 454 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 UNC13DQ70J99 1090 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 FAM126BQ8IXS8 530 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 DEPTORQ8TB45 409 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 CAGE1Q8TC20 777 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 NLRP7Q8WX94 980 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 GSDMAQ96QA5 445 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 XPNPEP1Q9NQW7 623 aa18.64■□□□□ 0.57
CCM2-205ENST00000472223 RPN1P04843 607 aaKnown RBP18.63■□□□□ 0.57
CCM2-205ENST00000472223 SRGAP2CP0DJJ0 459 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 PLS3P13797 630 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 SCP2P22307 547 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 ARL2P36404 184 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 PEX3P56589 373 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 TLE2Q04725 743 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 LAMTOR4Q0VGL1 99 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 PSMD2Q13200 908 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 CAVIN1Q6NZI2 390 aaKnown RBP18.63■□□□□ 0.57
CCM2-205ENST00000472223 RUFY4Q6ZNE9 571 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 ZBTB8OSQ8IWT0 167 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 FAM178BQ8IXR5 827 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 DNAJC19Q96DA6 116 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 ZBTB10Q96DT7 871 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 NLRP4Q96MN2 994 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 INO80BQ9C086 356 aaPredicted RBP18.63■□□□□ 0.57
CCM2-205ENST00000472223 GPRC5CQ9NQ84 441 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 KMT5AQ9NQR1 393 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 PRKAG2Q9UGJ0 569 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 PHLPP2Q6ZVD8 1323 aa18.63■□□□□ 0.57
CCM2-205ENST00000472223 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 SFI1A8K8P3 1242 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 VTNP04004 478 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 NAMPTP43490 491 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 PHKA2P46019 1235 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 NLRP11P59045 1033 aaKnown RBP18.62■□□□□ 0.57
CCM2-205ENST00000472223 MDM2Q00987 491 aaPredicted RBP18.62■□□□□ 0.57
CCM2-205ENST00000472223 DPYDQ12882 1025 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 HIC1Q14526 733 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 RPAINQ86UA6 219 aa18.62■□□□□ 0.57
CCM2-205ENST00000472223 ZNF410Q86VK4 478 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms