RNA–Protein interactions for RNA: ENST00000472050.5

NOP58-205, Transcript of NOP58 ribonucleoprotein, human

TSL 3

Gene NOP58, Length 582 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP58-205	ENST00000472050	CSPG5	O95196	566 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	HMGB1	P09429	215 aa	Known RBP	12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	HOXB8	P17481	243 aa	Predicted RBP	12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	KLRC1	P26715	233 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	ARHGAP8	P85298	464 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	UBE3A	Q05086	875 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	TMEM62	Q0P6H9	643 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	RBM23	Q86U06	439 aa	Known RBP	12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	NPAS4	Q8IUM7	802 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	CMTR2	Q8IYT2	770 aa	Known RBP	12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	KIAA0319L	Q8IZA0	1049 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	FLCN	Q8NFG4	579 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	POF1B	Q8WVV4	589 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	CHAMP1	Q96JM3	812 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	AGXT2	Q9BYV1	514 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	ZMYND12	Q9H0C1	365 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	S1PR5	Q9H228	398 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	CDHR5	Q9HBB8	845 aa		12.84	□□□□□ -0.35
NOP58-205	ENST00000472050	NID2	Q14112	1375 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	ZZEF1	O43149	2961 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	ZFYVE26	Q68DK2	2539 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	GOLGA8A	A7E2F4	631 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	GOLGA8B	A8MQT2	603 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	ATXN1	P54253	815 aa	Known RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	KRT76	Q01546	638 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	DUSP6	Q16828	381 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	PDE12	Q6L8Q7	609 aa	Known RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	PLA2G4D	Q86XP0	818 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	RASGRP4	Q8TDF6	673 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	RTKN	Q9BST9	563 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	ERVK-5	Q9HDB9	667 aa		12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	CDV3	Q9UKY7	258 aa	Known RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	MRPL42	Q9Y6G3	142 aa	Known RBP	12.83	□□□□□ -0.36
NOP58-205	ENST00000472050	COL1A2	P08123	1366 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	IPO5	O00410	1097 aa	Known RBP	12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	PRPF3	O43395	683 aa	Known RBP	12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	CDC45	O75419	566 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	SCG2	P13521	617 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	CPA1	P15085	419 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	CIITA	P33076	1130 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	ZNF76	P36508	570 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	LMNB2	Q03252	620 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	DMWD	Q09019	674 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	APOBR	Q0VD83	1088 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	NTRK3	Q16288	839 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	ZNF484	Q5JVG2	852 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	JAKMIP3	Q5VZ66	844 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	FAM160B1	Q5W0V3	765 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	SWSAP1	Q6NVH7	229 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	ANKRD54	Q6NXT1	300 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050		Q6ZUG5	572 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	ZDHHC14	Q8IZN3	488 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	TMEM40	Q8WWA1	233 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	ZNF302	Q9NR11	478 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	TSHZ2	Q9NRE2	1034 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	NOC2L	Q9Y3T9	749 aa	Known RBP	12.82	□□□□□ -0.36
NOP58-205	ENST00000472050		R4GN57	208 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	CEP295	Q9C0D2	2601 aa		12.82	□□□□□ -0.36
NOP58-205	ENST00000472050	SPEG	Q15772	3267 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	DENND4A	Q7Z401	1863 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	CCDC196	A0A1B0GTZ2	297 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050		M0QZ92	97 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	MGEA5	O60502	916 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	STAG3L1	P0CL83	205 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	HSPA4	P34932	840 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	SARS	P49591	514 aa	Known RBP	12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	METAP2	P50579	478 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	EVC	P57679	992 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	FAM189B	P81408	668 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	PAK2	Q13177	524 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	KCNC3	Q14003	757 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	TMEM266	Q2M3C6	531 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	PDXDC2P	Q6P474	469 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	PLCD3	Q8N3E9	789 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	KLHL23	Q8NBE8	558 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	VN1R2	Q8NFZ6	395 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	RGS18	Q9NS28	235 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	TBC1D22B	Q9NU19	505 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	SNX14	Q9Y5W7	946 aa		12.81	□□□□□ -0.36
NOP58-205	ENST00000472050	C2CD4D	B7Z1M9	353 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050		C9IYK1	514 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	DDX39A	O00148	427 aa	Known RBP	12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	BACH1	O14867	736 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	GPR32	O75388	356 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	C22orf31	O95567	290 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	NPR3	P17342	541 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	GATM	P50440	423 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	ITIH3	Q06033	890 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	TPRN	Q4KMQ1	711 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	MIS18BP1	Q6P0N0	1132 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	BBX	Q8WY36	941 aa	Predicted RBP	12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	BRF1	Q92994	677 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	LENG9	Q96B70	501 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	C6orf50	Q9HD87	102 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	ST3GAL5	Q9UNP4	418 aa		12.8	□□□□□ -0.36
NOP58-205	ENST00000472050	GCN1	Q92616	2671 aa	Known RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms