RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 NAPAP54920 295 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 USP46P62068 366 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 AP3B2Q13367 1082 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 CAMK1Q14012 370 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 CBX2Q14781 532 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-211ENST00000471455 PLA2G2CQ5R387 149 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 MTHFD1LQ6UB35 978 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 SLC24A5Q71RS6 500 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 MICU3Q86XE3 530 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 THNSL1Q8IYQ7 743 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 CRIPAKQ8N1N5 446 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 FANCBQ8NB91 859 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 PCYT2Q99447 389 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 CLEC1BQ9P126 229 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 PUF60Q9UHX1 559 aaKnown RBP10.38□□□□□ -0.75
CPSF4-211ENST00000471455 GINS2Q9Y248 185 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 USP15Q9Y4E8 981 aaPredicted RBP10.38□□□□□ -0.75
CPSF4-211ENST00000471455 TAF6LQ9Y6J9 622 aa10.38□□□□□ -0.75
CPSF4-211ENST00000471455 TBKBP1A7MCY6 615 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 LOC730098B7Z3J9 87 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 RXRAP19793 462 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-211ENST00000471455 DNAJB1P25685 340 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 PPM1AP35813 382 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ZXDAP98168 799 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 SIGLEC14Q08ET2 396 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ZNF484Q5JVG2 852 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 MCTP2Q6DN12 878 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 NIPA1Q7RTP0 329 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ADGRD2Q7Z7M1 963 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 RBM23Q86U06 439 aaKnown RBP10.37□□□□□ -0.75
CPSF4-211ENST00000471455 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
CPSF4-211ENST00000471455 SPIRE2Q8WWL2 714 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ANO3Q9BYT9 981 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ATP6V0A4Q9HBG4 840 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
CPSF4-211ENST00000471455 ERVK-5Q9HDB9 667 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 RIC8AQ9NPQ8 531 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 RGS18Q9NS28 235 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 BARX2Q9UMQ3 279 aaPredicted RBP10.37□□□□□ -0.75
CPSF4-211ENST00000471455 CEP131Q9UPN4 1083 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 LZTS1Q9Y250 596 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 KIAA1671Q9BY89 1806 aa10.37□□□□□ -0.75
CPSF4-211ENST00000471455 CACNA1HO95180 2353 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 FGF18O76093 207 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 KLRC1P26715 233 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 BMS1Q14692 1282 aaKnown RBP10.36□□□□□ -0.75
CPSF4-211ENST00000471455 DUSP6Q16828 381 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 TMEM266Q2M3C6 531 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 WWC2Q6AWC2 1192 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ZBTB33Q86T24 672 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 RTN4RL1Q86UN2 441 aaPredicted RBP10.36□□□□□ -0.75
CPSF4-211ENST00000471455 CKAP2LQ8IYA6 745 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ABI1Q8IZP0 508 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 FBXL6Q8N531 539 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 TRAPPC12Q8WVT3 735 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 RPGRIP1Q96KN7 1286 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ADAM2Q99965 735 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ELAC1Q9H777 363 aaKnown RBP10.36□□□□□ -0.75
CPSF4-211ENST00000471455 ZNF302Q9NR11 478 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 TMEM161AQ9NX61 479 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 PCDHGC3Q9UN70 934 aa10.36□□□□□ -0.75
CPSF4-211ENST00000471455 CNTNAP5Q8WYK1 1306 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 IGKV6D-21A0A0A0MT36 114 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 hCG_1642624A0A1W2PR95 340 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 CARNS1A5YM72 827 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 MEIS1O00470 390 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 SLC27A2O14975 620 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 PPFIA3O75145 1194 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 ATG7O95352 703 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 GLP2RO95838 553 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 HOXB8P17481 243 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 SREBF1P36956 1147 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 CRYBB1P53674 252 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 SETQ01105 290 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 KRT17Q04695 432 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 ITGB3BPQ13352 177 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 RTN1Q16799 776 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 SMAP1Q8IYB5 467 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 LRRC43Q8N309 656 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 COLGALT1Q8NBJ5 622 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 RSPH1Q8WYR4 309 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 FAM167AQ96KS9 214 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 MAP7D2Q96T17 732 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
CPSF4-211ENST00000471455 ENTPD7Q9NQZ7 604 aa10.35□□□□□ -0.75
CPSF4-211ENST00000471455 TMEM260Q9NX78 707 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms