RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FADS2P1A8MWK0 482 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 EYA2O00167 538 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 STXBP3O00186 592 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 PDE8BO95263 885 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 ENDOUP21128 410 aaKnown RBP8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 LBX1P52954 281 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 CACNB3P54284 484 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 TIMM10P62072 90 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 POU4F1Q01851 419 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 FXNQ16595 210 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 CFAP100Q494V2 611 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 MRM1Q6IN84 353 aaKnown RBP8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 ATF7IPQ6VMQ6 1270 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 ARHGEF39Q8N4T4 335 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 TMEM52Q8NDY8 209 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 SHISA4Q96DD7 197 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 APBA2Q99767 749 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 GBA2Q9HCG7 927 aaPredicted RBP8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 ST7Q9NRC1 585 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 TNFRSF10DQ9UBN6 386 aa8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 R3HCC1Q9Y3T6 440 aaKnown RBP8.28□□□□□ -1.08
PTP4A1-202ENST00000470661 SRGAP3O43295 1099 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 NRDCO43847 1150 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 GJB6O95452 261 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 FGFR2P21802 821 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 NOP2P46087 812 aaKnown RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 TFCP2Q12800 502 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 DLGAP5Q15398 846 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 MFSD14BQ5SR56 506 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 ZNF648Q5T619 568 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 C15orf52Q6ZUT6 534 aaKnown RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 NLRX1Q86UT6 975 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 NSUN3Q9H649 340 aaKnown RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 TDRD3Q9H7E2 651 aaKnown RBP8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 VEZTQ9HBM0 779 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 AKT3Q9Y243 479 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 TRPM7Q96QT4 1865 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 MROH5Q6ZUA9 1318 aa8.27□□□□□ -1.09
PTP4A1-202ENST00000470661 ZNF646O15015 1829 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 A0A1B0GUL6 1792 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 FGF10O15520 208 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 FRAT2O75474 233 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 CT47B1P0C2W7 299 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 TXKP42681 527 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 PHKA1P46020 1223 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 KIF23Q02241 960 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 HSF5Q4G112 596 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 ZKSCAN2Q63HK3 967 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 SLCO6A1Q86UG4 719 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 C2orf69Q8N8R5 385 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 RCC1LQ96I51 464 aaKnown RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 YTHDC1Q96MU7 727 aaKnown RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 JMJD8Q96S16 334 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 TANGO6Q9C0B7 1094 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 CWC22Q9HCG8 908 aaKnown RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 FAM53CQ9NYF3 392 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 YBX2Q9Y2T7 364 aaKnown RBP8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 TAF6LQ9Y6J9 622 aa8.26□□□□□ -1.09
PTP4A1-202ENST00000470661 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 AURKAO14965 403 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 IPO8O15397 1037 aaKnown RBP8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 KLF4O43474 513 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 SUSD5O60279 629 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 KCNH1O95259 989 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 HSPA8P11142 646 aaKnown RBP8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 NAT2P11245 290 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 AMPD2Q01433 879 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 PUM3Q15397 648 aaKnown RBP8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 ITPRIPQ8IWB1 547 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 BVESQ8NE79 360 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 ARHGAP45Q92619 1136 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 INTS4Q96HW7 963 aaKnown RBP8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 CLMNQ96JQ2 1002 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 PTCHD1Q96NR3 888 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 DEFB129Q9H1M3 183 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 HDAC9Q9UKV0 1011 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 FAM205AQ6ZU69 1335 aa8.25□□□□□ -1.09
PTP4A1-202ENST00000470661 PSME4Q14997 1843 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 GNAI2P04899 355 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 IFIT1P09914 478 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 SLC5A1P13866 664 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 SDHBP21912 280 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 ZNF143P52747 638 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 GRB10Q13322 594 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 SNX17Q15036 470 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 SV2CQ496J9 727 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 CAVIN4Q5BKX8 364 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 RGMBQ6NW40 437 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 POU5F2Q8N7G0 328 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 NEUROD6Q96NK8 337 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 TMEM39BQ9GZU3 492 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 SLC6A17Q9H1V8 727 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 IMPACTQ9P2X3 320 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms