RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 VCAM1P19320 739 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 RPA1P27694 616 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 MMP13P45452 471 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 COG2Q14746 738 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 QRICH1Q2TAL8 776 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 CBWD6Q4V339 395 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 TNFAIP8L3Q5GJ75 292 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 CBWD3Q5JTY5 395 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 CBWD5Q5RIA9 395 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 PIGWQ7Z7B1 504 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 FIZ1Q96SL8 496 aa11.18□□□□□ -0.62
SMC4-210ENST00000469762 SFI1A8K8P3 1242 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 CHN1P15882 459 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 ANXA13P27216 316 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 IFI16Q16666 785 aaKnown RBP11.17□□□□□ -0.62
SMC4-210ENST00000469762 CACNA2D3Q8IZS8 1091 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 FBXO25Q8TCJ0 367 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 FMO2Q99518 471 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 ERP44Q9BS26 406 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 FAM114A2Q9NRY5 505 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
SMC4-210ENST00000469762 QSER1Q2KHR3 1735 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 EML1O00423 815 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 LRRN2O75325 713 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 ODF2Q5BJF6 829 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 TTC27Q6P3X3 843 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 KSR1Q8IVT5 923 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 THAP2Q9H0W7 228 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 VAV3Q9UKW4 847 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
SMC4-210ENST00000469762 TP73O15350 636 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
SMC4-210ENST00000469762 UFL1O94874 794 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 HVCN1Q96D96 273 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
SMC4-210ENST00000469762 ZBTB39O15060 712 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 TMEM253P0C7T8 217 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 PLCG2P16885 1265 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SOX5P35711 763 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.623e-7■■■■■ 122.4
SMC4-210ENST00000469762 ZNF568Q3ZCX4 644 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SIAH1Q8IUQ4 282 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 CERS5Q8N5B7 392 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 RFFLQ8WZ73 363 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 PABPC3Q9H361 631 aaKnown RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 AMFRQ9UKV5 643 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SLC12A4Q9UP95 1085 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ANKRD63C9JTQ0 380 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SLC16A3O15427 465 aaKnown RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 MARCH6O60337 910 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ATP2C2O75185 946 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ABCB4P21439 1286 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 PRR16Q569H4 304 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 KRT35Q92764 455 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 C18orf8Q96DM3 657 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SEMA4AQ9H3S1 761 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 GHRP10912 638 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SNAP25P60880 206 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ARHGAP4P98171 946 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 DR1Q01658 176 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SLC29A2Q14542 456 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 DRAP1Q14919 205 aaPredicted RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 GKAP1Q5VSY0 366 aaPredicted RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 CPNE8Q86YQ8 564 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 JAMLQ86YT9 394 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SYCE1Q8N0S2 351 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 PRELID2Q8N945 189 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 LMO3Q8TAP4 145 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 MAGEC3Q8TD91 643 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 PGM2Q96G03 612 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 SNX24Q9Y343 169 aa11.16□□□□□ -0.62
SMC4-210ENST00000469762 ZNFX1Q9P2E3 1918 aaKnown RBP11.16□□□□□ -0.62
SMC4-210ENST00000469762 SLC26A4O43511 780 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
SMC4-210ENST00000469762 CCDC172P0C7W6 258 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 CYP4A11Q02928 519 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 CARD9Q9H257 536 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 BHMT2Q9H2M3 363 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 RGL1Q9NZL6 768 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 AGAP1Q9UPQ3 857 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 PCDHA1Q9Y5I3 950 aa11.15□□□□□ -0.62
SMC4-210ENST00000469762 EP400Q96L91 3159 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms