RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CEP170P1Q96L14 293 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 IFT74Q96LB3 600 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 STRA6Q9BX79 667 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CYP26B1Q9NR63 512 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 TRMT1Q9NXH9 659 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CEP72Q9P209 647 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 MORF4L1Q9UBU8 362 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 ABT1Q9ULW3 272 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 IVNS1ABPQ9Y6Y0 642 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 PHLPP2Q6ZVD8 1323 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 SYNGAP1Q96PV0 1343 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 IGKV6D-21A0A0A0MT36 114 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 GTPBP10A4D1E9 387 aaKnown RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 SOWAHDA6NJG2 315 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 SFI1A8K8P3 1242 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 MAPK13O15264 365 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 STRNO43815 780 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 POLGP54098 1239 aaPredicted RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 GTF2BQ00403 316 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 SP4Q02446 784 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 ZC2HC1CQ53FD0 456 aaPredicted RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 HAUS6Q7Z4H7 955 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 ZNF467Q7Z7K2 595 aaPredicted RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 FMNL3Q8IVF7 1028 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 EXOC8Q8IYI6 725 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 CCDC170Q8IYT3 715 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 AFAP1L1Q8TED9 768 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 MS4A4AQ96JQ5 239 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 AZI2Q9H6S1 392 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 MMRN2Q9H8L6 949 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 ZCCHC17Q9NP64 241 aaKnown RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 MAFBQ9Y5Q3 323 aaPredicted RBP10.24□□□□□ -0.77
SMC1A-205ENST00000469129 EMSYQ7Z589 1322 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 KAT6AQ92794 2004 aa10.24□□□□□ -0.77
SMC1A-205ENST00000469129 BTBD19C9JJ37 291 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 NOP56O00567 594 aaKnown RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 TGFB1I1O43294 461 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 GAS2O43903 313 aaKnown RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 ZNF862O60290 1169 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 AKAP3O75969 853 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 GGPS1O95749 300 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 KRT13P13646 458 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 HNRNPH3P31942 346 aaKnown RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 SLC26A2P50443 739 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 NPEPPSP55786 919 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 PEX3P56589 373 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 KRT83P78385 493 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 TTLL4Q14679 1199 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 EMC2Q15006 297 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 DCAF17Q5H9S7 520 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 TCERG1LQ5VWI1 586 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 CST9Q5W186 159 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 TOGARAM2Q6ZUX3 1019 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 SCFD2Q8WU76 684 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 SLC7A3Q8WY07 619 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 BRI3BPQ8WY22 251 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 SEPT1Q8WYJ6 367 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 SYN2Q92777 582 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 LSM14BQ9BX40 385 aaKnown RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 MLXIPQ9HAP2 919 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 VTA1Q9NP79 307 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 PLCB1Q9NQ66 1216 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
SMC1A-205ENST00000469129 MYO6Q9UM54 1294 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
SMC1A-205ENST00000469129 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 CCDC169A6NNP5 214 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 CLIC2O15247 247 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 EXOC3O60645 756 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 PEX10O60683 326 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 STBD1O95210 358 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 NDUFA10O95299 355 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 PGK2P07205 417 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 CYP2C8P10632 490 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 RFX1P22670 979 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 MAPK4P31152 587 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 TCF7P36402 384 aaPredicted RBP10.22□□□□□ -0.77
SMC1A-205ENST00000469129 KLK7P49862 253 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 CYP2J2P51589 502 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 ETF1P62495 437 aaKnown RBP10.22□□□□□ -0.77
SMC1A-205ENST00000469129 SP2Q02086 613 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 FAM110CQ1W6H9 321 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 Q3C1V9 767 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 MTERF2Q49AM1 385 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 PDXDC1Q6P996 788 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 GBP6Q6ZN66 633 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
SMC1A-205ENST00000469129 INTS8Q75QN2 995 aaKnown RBP10.22□□□□□ -0.77
SMC1A-205ENST00000469129 MAEAQ7L5Y9 396 aa10.22□□□□□ -0.77
SMC1A-205ENST00000469129 USP37Q86T82 979 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms