RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 GRAMD1CQ8IYS0 662 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 PSPC1Q8WXF1 523 aaKnown RBP9□□□□□ -0.97
HDAC6-216ENST00000468949 KAT2BQ92831 832 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 KIFAP3Q92845 792 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 ANP32EQ9BTT0 268 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 RUSC1Q9BVN2 902 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 SEZ6LQ9BYH1 1024 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 TRIM9Q9C026 710 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 SENP6Q9GZR1 1112 aaPredicted RBP9□□□□□ -0.97
HDAC6-216ENST00000468949 BLZF1Q9H2G9 400 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 RNPEPQ9H4A4 650 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 SUGCTQ9HAC7 445 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 SETD4Q9NVD3 440 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 KBTBD4Q9NVX7 518 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 ODF2LQ9ULJ1 636 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 PHF24Q9UPV7 400 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 AKT3Q9Y243 479 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 COL4A3BPQ9Y5P4 624 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 LOXHD1Q8IVV2 1947 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 HAS3O00219 553 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 HIP1RO75146 1068 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 RPLP2P05387 115 aaKnown RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 CYP2C9P11712 490 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 GAP43P17677 238 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 ATP4AP20648 1035 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 GUCY2CP25092 1073 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 KLRC1P26715 233 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 CLCN6P51797 869 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 PTPN11Q06124 597 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 PNOCQ13519 176 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 TFDP1Q14186 410 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 L1TD1Q5T7N2 865 aaKnown RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 CCSAPQ6IQ19 270 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 RINT1Q6NUQ1 792 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 CNNM4Q6P4Q7 775 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 MTHFD1LQ6UB35 978 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 SASS6Q6UVJ0 657 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 ELOA2Q8IYF1 753 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 MYCT1Q8N699 235 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 TRAPPC12Q8WVT3 735 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 C7orf25Q9BPX7 421 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 REEP2Q9BRK0 252 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 GTPBP4Q9BZE4 634 aaKnown RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 FAM49AQ9H0Q0 323 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 POLR3FQ9H1D9 316 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 PARVGQ9HBI0 331 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 PANK4Q9NVE7 773 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 LARSQ9P2J5 1176 aaKnown RBP8.99□□□□□ -0.97
HDAC6-216ENST00000468949 GTF2IRD1Q9UHL9 959 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 KCNG1Q9UIX4 513 aa8.99□□□□□ -0.97
HDAC6-216ENST00000468949 MYMKA6NI61 221 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 LRRIQ4A6NIV6 560 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 H0YCG3 227 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 K7ENM7 598 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 ARVCFO00192 962 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 MAFO75444 373 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 KIF20AO95235 890 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 C22orf31O95567 290 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 RPN1P04843 607 aaKnown RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 CLCN3P51790 818 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 SMTNP53814 917 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 ATN1P54259 1190 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 RTP1P59025 263 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 STIM1Q13586 685 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 CUL4BQ13620 913 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 MXD4Q14582 209 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 SNX17Q15036 470 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 PTGISQ16647 500 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 HERC4Q5GLZ8 1057 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 ODR4Q5SWX8 454 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 IER5Q5VY09 327 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 EFCAB12Q6NXP0 572 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 C1orf186Q6ZWK4 172 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 UNC13DQ70J99 1090 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 ZBTB8OSQ8IWT0 167 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 FAM178BQ8IXR5 827 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 LRRC71Q8N4P6 559 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 SLC17A8Q8NDX2 589 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 DEPTORQ8TB45 409 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 NLRP7Q8WX94 980 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 TMEM143Q96AN5 459 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 GSDMAQ96QA5 445 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 DHX33Q9H6R0 707 aaKnown RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 SUCLA2Q9P2R7 463 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 SEL1LQ9UBV2 794 aa8.98□□□□□ -0.97
HDAC6-216ENST00000468949 ZMYND8Q9ULU4 1186 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-216ENST00000468949 MYH9P35579 1960 aaKnown RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 NPHP3-ACAD11A0A0J9YXS1 232 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 SMIM35A0A1B0GVV1 85 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PVALEFA0A1B0GWK0 134 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 A0A1W2PPC1 479 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 CCDC169A6NNP5 214 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
HDAC6-216ENST00000468949 GABBR2O75899 941 aa8.97□□□□□ -0.97
HDAC6-216ENST00000468949 STBD1O95210 358 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms