RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ODR4Q5SWX8 454 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 TMTC1Q8IUR5 882 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 CREBRFQ8IUR6 639 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 FAM178BQ8IXR5 827 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 C2orf69Q8N8R5 385 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 GPRC5AQ8NFJ5 357 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNN1Q92952 543 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 DNAJC7Q99615 494 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 RRAGCQ9HB90 399 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 METTL14Q9HCE5 456 aaKnown RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 GABBR1Q9UBS5 961 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 MORF4L1Q9UBU8 362 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 IGSF9BQ9UPX0 1349 aa10.5□□□□□ -0.73
APOBEC1-202ENST00000467171 OTOFQ9HC10 1997 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 GOLGA6L9A6NEM1 432 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 RASSF10A6NK89 507 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SFI1A8K8P3 1242 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 BACH1O14867 736 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 TGFB1I1O43294 461 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 ZSCAN12O43309 604 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF862O60290 1169 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 NR3C1P04150 777 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 NR2F2P24468 414 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 KRT9P35527 623 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 RTP1P59025 263 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SP2Q02086 613 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SYCP1Q15431 976 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 CCDC40Q4G0X9 1142 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 XKR9Q5GH70 373 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 XKR3Q5GH77 459 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 ANO5Q75V66 913 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 ABRAQ8N0Z2 381 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 OR8K1Q8NGG5 319 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 BRI3BPQ8WY22 251 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 KIFAP3Q92845 792 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 FGD4Q96M96 766 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 MMP19Q99542 508 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 TMEM206Q9H813 350 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 ABHD10Q9NUJ1 306 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNG1Q9UIX4 513 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SIK3Q9Y2K2 1263 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 LUC7L2Q9Y383 392 aaKnown RBP10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 PPME1Q9Y570 386 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 MAFBQ9Y5Q3 323 aaPredicted RBP10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 SYNGAP1Q96PV0 1343 aa10.49□□□□□ -0.73
APOBEC1-202ENST00000467171 POLR2AP24928 1970 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 RBBP6Q7Z6E9 1792 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CCL15-CCL14A0A0B4J2E2 113 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 TTC26A0AVF1 554 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 BTBD19C9JJ37 291 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 PDHXO00330 501 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 PES1O00541 588 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 SOCS7O14512 581 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 PEX10O60683 326 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 DGAT1O75907 488 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 FARP2O94887 1054 aaPredicted RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 SCP2P22307 547 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 NMT1P30419 496 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 HNRNPH3P31942 346 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ABCD1P33897 745 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ZBED6P86452 979 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 GTF2BQ00403 316 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CDK17Q00537 523 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNC4Q03721 635 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 GOLGA8FQ08AF8 430 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 GOLGA8DPQ0D2H9 430 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 FSTL1Q12841 308 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 MEA1Q16626 185 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CCL15Q16663 113 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 SWSAP1Q6NVH7 229 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 METTL7BQ6UX53 244 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 HS2ST1Q7LGA3 356 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CCDC60Q8IWA6 550 aaPredicted RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 MCPH1Q8NEM0 835 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 HVCN1Q96D96 273 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 BORCS6Q96GS4 357 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 PPP1R13BQ96KQ4 1090 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 PRIMPOLQ96LW4 560 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 CCDC43Q96MW1 224 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 NTPCRQ9BSD7 190 aaKnown RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 GBP3Q9H0R5 595 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 BCAS3Q9H6U6 928 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF408Q9H9D4 720 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ARMCX3Q9UH62 379 aaPredicted RBP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
APOBEC1-202ENST00000467171 ASB14A6NK59 587 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 USP27XA6NNY8 438 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms