RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 FBXL16Q8N461 479 aa12.12□□□□□ -0.47
CMC1-205ENST00000466830 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.47
CMC1-205ENST00000466830 SEPT10Q9P0V9 454 aa12.12□□□□□ -0.47
CMC1-205ENST00000466830 JCADQ9P266 1359 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 NDUFB10O96000 172 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 GYPCP04921 128 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 GSPT2Q8IYD1 628 aaKnown RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 RGL1Q9NZL6 768 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 PPP1R3GB7ZBB8 358 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 CLDN3O15551 220 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 KRT39Q6A163 491 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 ERICH1Q86X53 443 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 GLYCTKQ8IVS8 523 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 RPF1Q9H9Y2 349 aaKnown RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 ESYT3A0FGR9 886 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 FDX1P10109 184 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SLC8A1P32418 973 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SPP2Q13103 211 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 TMED2Q15363 201 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 CCDC38Q502W7 563 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SLC26A4O43511 780 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.473e-8■■■□□ 15
CMC1-205ENST00000466830 MSH2P43246 934 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 VSNL1P62760 191 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 COG1Q8WTW3 980 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 DDX47Q9H0S4 455 aaKnown RBP12.11□□□□□ -0.47
CMC1-205ENST00000466830 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
CMC1-205ENST00000466830 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 BASP1P80723 227 aaKnown RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 KCTD6Q8NC69 237 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 RFFLQ8WZ73 363 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 NLRP4Q96MN2 994 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 FAM213AQ9BRX8 229 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 TBK1Q9UHD2 729 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 SOX5P35711 763 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 MYO1EQ12965 1108 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 SLC18A3Q16572 532 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 SCARA5Q6ZMJ2 495 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 NUB1Q9Y5A7 615 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 NLRP7Q8WX94 980 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 PDCLQ13371 301 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 THNSL1Q8IYQ7 743 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 TACO1Q9BSH4 297 aaKnown RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 ENTPD3O75355 529 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 ACSL3O95573 720 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 KLRK1P26718 216 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
CMC1-205ENST00000466830 PDE1BQ01064 536 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 NTRK3Q16288 839 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
CMC1-205ENST00000466830 PRPSAP2O60256 369 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
CMC1-205ENST00000466830 DARS2Q6PI48 645 aaKnown RBP12.09□□□□□ -0.47
CMC1-205ENST00000466830 C7orf31Q8N865 590 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
CMC1-205ENST00000466830 MARK3P27448 753 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 TOB1P50616 345 aaPredicted RBP12.09□□□□□ -0.47
CMC1-205ENST00000466830 MAPK6Q16659 721 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 PDIK1LQ8N165 341 aa12.09□□□□□ -0.47
CMC1-205ENST00000466830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
CMC1-205ENST00000466830 ZNF564Q8TBZ8 553 aaPredicted RBP12.09□□□□□ -0.47
CMC1-205ENST00000466830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.09□□□□□ -0.47
CMC1-205ENST00000466830 PFASO15067 1338 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms