RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	METAP2	P50579	478 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	CLCN3	P51790	818 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	BMS1	Q14692	1282 aa	Known RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	CLLU1OS	Q5K130	101 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	CWF19L1	Q69YN2	538 aa	Known RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	WWC2	Q6AWC2	1192 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	SWSAP1	Q6NVH7	229 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	MIS18BP1	Q6P0N0	1132 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	TMTC3	Q6ZXV5	915 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	ECHDC2	Q86YB7	292 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	PLCD3	Q8N3E9	789 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	C12orf76	Q8N812	135 aa	Predicted RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	TMEM87A	Q8NBN3	555 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	RIC8A	Q9NPQ8	531 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	AKT3	Q9Y243	479 aa		13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	RBM8A	Q9Y5S9	174 aa	Known RBP	13.67	□□□□□ -0.22
TRA2B-208	ENST00000465245	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	NT5C1B-RDH14	C9J2C7	533 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	SGSM2	O43147	1006 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	CXCL14	O95715	111 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	ATP4A	P20648	1035 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	SREBF1	P36956	1147 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	ADCY7	P51828	1080 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	ATAT1	Q5SQI0	421 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	PPP1R18	Q6NYC8	613 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	MICU3	Q86XE3	530 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	HELQ	Q8TDG4	1101 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	BBX	Q8WY36	941 aa	Predicted RBP	13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	MAP4K1	Q92918	833 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	TMEM169	Q96HH4	297 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	MAP7D2	Q96T17	732 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	UST	Q9Y2C2	406 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	SLC12A7	Q9Y666	1083 aa		13.66	□□□□□ -0.22
TRA2B-208	ENST00000465245	EOMES	O95936	686 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	AOC1	P19801	751 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	LIFR	P42702	1097 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	ALDH7A1	P49419	539 aa	Known RBP	13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	BCAR1	P56945	870 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	NLRP11	P59045	1033 aa	Known RBP	13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	AP3B2	Q13367	1082 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	ANGPT1	Q15389	498 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	TYW1B	Q6NUM6	668 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	KANK3	Q6NY19	840 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	NIPA1	Q7RTP0	329 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	PLA2G4D	Q86XP0	818 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	TEX2	Q8IWB9	1127 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	FANCB	Q8NB91	859 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	MRPL9	Q9BYD2	267 aa	Known RBP	13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	CYP26B1	Q9NR63	512 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	TCEAL9	Q9UHQ7	104 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	CEP131	Q9UPN4	1083 aa		13.65	□□□□□ -0.22
TRA2B-208	ENST00000465245	CNTNAP5	Q8WYK1	1306 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	EP300	Q09472	2414 aa	Predicted RBP	13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	FAM86B1	E9PN63	330 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	FAM86B2	P0C5J1	330 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	EPCAM	P16422	314 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	EIF4B	P23588	611 aa	Known RBP	13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	TMOD1	P28289	359 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	CCDC105	Q8IYK2	499 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	VPS52	Q8N1B4	723 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	AUTS2	Q8WXX7	1259 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	ACSF2	Q96CM8	615 aa	Predicted RBP	13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	SCLT1	Q96NL6	688 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	LRRC2	Q9BYS8	371 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZBP1	Q9H171	429 aa		13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.64	□□□□□ -0.23
TRA2B-208	ENST00000465245		A0A0U1RQF3	1178 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	SMCO2	A6NFE2	343 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	SPDYE4	A6NLX3	237 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	IPO5	O00410	1097 aa	Known RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	MAGEB2	O15479	319 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	DHX15	O43143	795 aa	Known RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	PI15	O43692	258 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	TDG	Q13569	410 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	COL9A3	Q14050	684 aa	Predicted RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	EFCAB12	Q6NXP0	572 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	TMC5	Q6UXY8	1006 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	CCDC149	Q6ZUS6	474 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF598	Q86UK7	904 aa	Known RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	CABP7	Q86V35	215 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	LRRC71	Q8N4P6	559 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF668	Q96K58	619 aa	Predicted RBP	13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	RTP3	Q9BQQ7	232 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	ZNF577	Q9BSK1	485 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	ADAMTS10	Q9H324	1103 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	DACT1	Q9NYF0	836 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	FBXL21	Q9UKT6	434 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	IRAK3	Q9Y616	596 aa		13.63	□□□□□ -0.23
TRA2B-208	ENST00000465245	IGLV3-22	A0A075B6J6	115 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	hCG_1984214	I3L0E3	225 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	PSAP	P07602	524 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	CTSA	P10619	480 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	NPR3	P17342	541 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	FGFR4	P22455	802 aa		13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	CLK2	P49760	499 aa	Known RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	POLG	P54098	1239 aa	Predicted RBP	13.62	□□□□□ -0.23
TRA2B-208	ENST00000465245	GIT2	Q14161	759 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms