RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SNX17Q15036 470 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 FSCN1Q16658 493 aaKnown RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 SEPT14Q6ZU15 432 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CEP112Q8N8E3 955 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 LRRN4CLQ8ND94 238 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 HAS1Q92839 578 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 HAUS4Q9H6D7 363 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 DDX25Q9UHL0 483 aaKnown RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 EPN1Q9Y6I3 576 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 FRMPD3Q5JV73 1810 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 TBX3O15119 743 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CABYRO75952 493 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ARIH2O95376 493 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 FOSP01100 380 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 HNRNPH3P31942 346 aaKnown RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ARHGAP25P42331 645 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 BMS1Q14692 1282 aaKnown RBP10.92□□□□□ -0.66
PTPRD-207ENST00000463477 MIIPQ5JXC2 388 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 PCNX4Q63HM2 1172 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 KCTD17Q8N5Z5 321 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 SNX29Q8TEQ0 813 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CRYGNQ8WXF5 182 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 GLT1D1Q96MS3 346 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 SEMA6BQ9H3T3 888 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 KCNMB3Q9NPA1 279 aa10.92□□□□□ -0.66
PTPRD-207ENST00000463477 CTAGE9A4FU28 777 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 A6NJR5 290 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 H0YGN5 161 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 ZRANB2O95218 330 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPRD-207ENST00000463477 ICAM3P32942 547 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 MTIF2P46199 727 aaKnown RBP10.91□□□□□ -0.66
PTPRD-207ENST00000463477 CPT1AP50416 773 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 CLCN6P51797 869 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 FAM193AP78312 1265 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 KRT83P78385 493 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 MRPS9P82933 396 aaKnown RBP10.91□□□□□ -0.66
PTPRD-207ENST00000463477 BEX3Q00994 111 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 GABPB1Q06547 395 aaPredicted RBP10.91□□□□□ -0.66
PTPRD-207ENST00000463477 TBC1D8BQ0IIM8 1120 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 MCM6Q14566 821 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 LY6KQ17RY6 165 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 FKBP15Q5T1M5 1219 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 KRT222Q8N1A0 295 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 GOLGA1Q92805 767 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 INPP4AQ96PE3 977 aaPredicted RBP10.91□□□□□ -0.66
PTPRD-207ENST00000463477 EDEM3Q9BZQ6 932 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 LZTFL1Q9NQ48 299 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
PTPRD-207ENST00000463477 POTEMA6NI47 508 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 SPDYE3A6NKU9 549 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 EIF3CLB5ME19 914 aaKnown RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 KPNA6O60684 536 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 GH1P01241 217 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 PRKCSHP14314 528 aaPredicted RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 CYLC1P35663 651 aaPredicted RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 CDK7P50613 346 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 RTP1P59025 263 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 CBX1P83916 185 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 MAN2A1Q16706 1144 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 UBE2SQ16763 222 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 WHAMMP3Q1A5X7 153 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 BRDTQ58F21 947 aaPredicted RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 ZNF569Q5MCW4 686 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 WDR59Q6PJI9 974 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 SLFN12Q8IYM2 578 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 EHBP1Q8NDI1 1231 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 ACRBPQ8NEB7 543 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 COPS5Q92905 334 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 DNAJC19Q96DA6 116 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 EIF3CQ99613 913 aaKnown RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 NAPGQ99747 312 aaPredicted RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 NOC4LQ9BVI4 516 aaKnown RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 ANO3Q9BYT9 981 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 ZNHIT6Q9NWK9 470 aaKnown RBP10.9□□□□□ -0.66
PTPRD-207ENST00000463477 ZNF446Q9NWS9 450 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 PCDHA12Q9UN75 941 aa10.9□□□□□ -0.66
PTPRD-207ENST00000463477 SPATA31C2B4DYI2 1134 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 MAFGO15525 162 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 KIF20AO95235 890 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 TUBBP07437 444 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 TRIM21P19474 475 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 Q4G0T1 1027 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 VWA3BQ502W6 1294 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms