RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SMTNL1A8MU46 457 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 KLRC4O43908 158 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 HOXD8P13378 290 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 CYP2C18P33260 490 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 STAT5BP51692 787 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 PSRC1Q6PGN9 363 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 PADI6Q6TGC4 694 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 C11orf57Q6ZUT1 292 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 GLG1Q92896 1179 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 FAM167AQ96KS9 214 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 GPR20Q99678 358 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 IL23AQ9NPF7 189 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 NRBP2Q9NSY0 501 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 TRMT13Q9NUP7 481 aaKnown RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 STXBP5LQ9Y2K9 1186 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 MAFBQ9Y5Q3 323 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 SCN10AQ9Y5Y9 1956 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 IGKV6D-21A0A0A0MT36 114 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 PPFIA4O75335 1185 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 FAM13AO94988 1023 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 GAP43P17677 238 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 SLC26A2P50443 739 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 PRKCEQ02156 737 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 DGKDQ16760 1214 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 UVSSAQ2YD98 709 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 AFAP1L1Q8TED9 768 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 DNAJC19Q96DA6 116 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 WNT8AQ9H1J5 351 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 SMARCAD1Q9H4L7 1026 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 CBX8Q9HC52 389 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 ODF2LQ9ULJ1 636 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
TMEM39A-203ENST00000461654 UMODL1Q5DID0 1318 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 TMEM265A0A087WTH1 108 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 ZBTB39O15060 712 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 KIF20AO95235 890 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 OATP04181 439 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 GUCY2CP25092 1073 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 ERCC5P28715 1186 aaPredicted RBP16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 RARRES1P49788 294 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 RAD51AP2Q09MP3 1159 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 GIT2Q14161 759 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 HSDL1Q3SXM5 330 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 ARSHQ5FYA8 562 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 ZNF697Q5TEC3 545 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 ZNF365Q70YC5 407 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 TRMT1LQ7Z2T5 733 aaKnown RBP16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 RPUSD2Q8IZ73 545 aaKnown RBP16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 HERVK_113Q902F9 699 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 KAT2BQ92831 832 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 REEP2Q9BRK0 252 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 RUSC1Q9BVN2 902 aa16.8■□□□□ 0.28
TMEM39A-203ENST00000461654 EMSYQ7Z589 1322 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 NPHP3-ACAD11A0A0J9YXS1 232 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 ZNF862O60290 1169 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 LGR5O75473 907 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 FGBP02675 491 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 BMP6P22004 513 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 COASYQ13057 564 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 C1orf186Q6ZWK4 172 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 ANO5Q75V66 913 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 KATNAL1Q9BW62 490 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 PPME1Q9Y570 386 aa16.79■□□□□ 0.28
TMEM39A-203ENST00000461654 HAS3O00219 553 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 PSMA7O14818 248 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 F2P00734 622 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 PFKMP08237 780 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 ACRP10323 421 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 CYP2C9P11712 490 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 CCL23P55773 120 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 FAM47CQ5HY64 1035 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 FAM26FQ5R3K3 315 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 PLA2G4FQ68DD2 849 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 LUZP1Q86V48 1076 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 AOPEPQ8N6M6 819 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 VWCEQ96DN2 955 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 GUCD1Q96NT3 240 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 SEL1LQ9UBV2 794 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 ZNF215Q9UL58 517 aaPredicted RBP16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 TELO2Q9Y4R8 837 aa16.78■□□□□ 0.28
TMEM39A-203ENST00000461654 FRMD3A2A2Y4 597 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms