RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 CHRDL2Q6WN34 429 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 DEFB128Q7Z7B8 93 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 RPUSD2Q8IZ73 545 aaKnown RBP15.72■□□□□ 0.11
SMPD4-215ENST00000457039 SYT2Q8N9I0 419 aaPredicted RBP15.72■□□□□ 0.11
SMPD4-215ENST00000457039 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■■■□□ 17.5
SMPD4-215ENST00000457039 TCHHQ07283 1943 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 LOXHD1Q8IVV2 1947 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 TET1Q8NFU7 2136 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 M0QZ92 97 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 GHRP10912 638 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 TXLNAP40222 546 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 CRYBB1P53674 252 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 CDC42EP1Q00587 391 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 LPIN1Q14693 890 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 KIZQ2M2Z5 673 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 TCTN1Q2MV58 587 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PLEKHG4Q58EX7 1191 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 RESP18Q5W5W9 173 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PSRC1Q6PGN9 363 aaPredicted RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 C1orf186Q6ZWK4 172 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 MCPH1Q8NEM0 835 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 TMEM40Q8WWA1 233 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PRPF31Q8WWY3 499 aaKnown RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PSPC1Q8WXF1 523 aaKnown RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 RAD54LQ92698 747 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 PPP1R16BQ96T49 567 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 OSMRQ99650 979 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 UBE2OQ9C0C9 1292 aaKnown RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 AGO3Q9H9G7 860 aaKnown RBP15.71■□□□□ 0.11
SMPD4-215ENST00000457039 CCDC39Q9UFE4 941 aa15.71■□□□□ 0.11
SMPD4-215ENST00000457039 C9orf50Q5SZB4 431 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 RASIP1Q5U651 963 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 ADALQ6DHV7 355 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 ZNF365Q70YC5 407 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 ZNF410Q86VK4 478 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 RHPN2Q8IUC4 686 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 KSR1Q8IVT5 923 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 RASSF8Q8NHQ8 419 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 ASAP3Q8TDY4 903 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 RUSC1Q9BVN2 902 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 GDPD2Q9HCC8 539 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 GPRC5CQ9NQ84 441 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 STK17AQ9UEE5 414 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
SMPD4-215ENST00000457039 A0A087WZ62 844 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 ASAP2O43150 1006 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 FGBP02675 491 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 GLRA2P23416 452 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 LAMTOR4Q0VGL1 99 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 MCM6Q14566 821 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 SHHQ15465 462 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 E2F4Q16254 413 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 RRAGBQ5VZM2 374 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 DBF4BQ8NFT6 615 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 HERVK_113Q902F9 699 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 LARP4BQ92615 738 aaKnown RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 IFT122Q9HBG6 1241 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 KCND2Q9NZV8 630 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 COLQQ9Y215 455 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 GINS2Q9Y248 185 aa15.69■□□□□ 0.1
SMPD4-215ENST00000457039 NOC2LQ9Y3T9 749 aaKnown RBP15.69■□□□□ 0.1
SMPD4-215ENST00000457039 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 DARSP14868 501 aaKnown RBP15.68■□□□□ 0.1
SMPD4-215ENST00000457039 EIF4BP23588 611 aaKnown RBP15.68■□□□□ 0.1
SMPD4-215ENST00000457039 CMA1P23946 247 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 MAPK7Q13164 816 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 MXD4Q14582 209 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-215ENST00000457039 FAM102BQ5T8I3 360 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 MAEAQ7L5Y9 396 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 FAM228AQ86W67 206 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 DAW1Q8N136 415 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 NLRP7Q8WX94 980 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 BSNDQ8WZ55 320 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 SEPT8Q92599 483 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 TIPINQ9BVW5 301 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
SMPD4-215ENST00000457039 PANK2Q9BZ23 570 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 ERVK-5Q9HDB9 667 aa15.68■□□□□ 0.1
SMPD4-215ENST00000457039 A0A1W2PPC1 479 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 A0A1W2PQ27 194 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 A0A1W2PQ64 194 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 A0A1W2PQD8 194 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 HIP1RO75146 1068 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 SSBP05455 408 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMPD4-215ENST00000457039 CD52P31358 61 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 POU5F1BQ06416 359 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 CAPSQ13938 189 aa15.67■□□□□ 0.1
SMPD4-215ENST00000457039 OTOP2Q7RTS6 562 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms