RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RTN4RL1Q86UN2 441 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 FAM228AQ86W67 206 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 MAFAQ8NHW3 353 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 PIGOQ8TEQ8 1089 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 TMEM143Q96AN5 459 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 NLRP4Q96MN2 994 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 MTRQ99707 1265 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 STK24Q9Y6E0 443 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 A0A087WZ62 844 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 LINC01553A4QN01 128 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 GTPBP6O43824 516 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 GAS2O43903 313 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 XRCC6P12956 609 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 EMC2Q15006 297 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 HAUS3Q68CZ6 603 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 DTHD1Q6ZMT9 781 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 CATSPER3Q86XQ3 398 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 HSCBQ8IWL3 235 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 FIBCD1Q8N539 461 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 C4orf32Q8N8J7 132 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 PSPC1Q8WXF1 523 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 PPM1EQ8WY54 764 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 NACC1Q96RE7 527 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 FDXACB1Q9BRP7 624 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 POLR3CQ9BUI4 534 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 TMX1Q9H3N1 280 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 DHX33Q9H6R0 707 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 C1orf112Q9NSG2 853 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 MYO9BQ13459 2157 aa20.16■□□□□ 0.82
PDLIM2-215ENST00000456545 A0A087WWV3 80 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 RFXAPO00287 272 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 ASAP2O43150 1006 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 ARHGEF15O94989 841 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 HSP90AA1P07900 732 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 SRGAP2CP0DJJ0 459 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 CCT6AP40227 531 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 FXR2P51116 673 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 PDIA5Q14554 519 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 SLC24A5Q71RS6 500 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 ZNF410Q86VK4 478 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 NPAS4Q8IUM7 802 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 PRPF31Q8WWY3 499 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 INTS4Q96HW7 963 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 RGS18Q9NS28 235 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 COL4A3BPQ9Y5P4 624 aa20.15■□□□□ 0.82
PDLIM2-215ENST00000456545 MED24O75448 989 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 CSDE1O75534 798 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 DGAT1O75907 488 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 SFPQP23246 707 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 RPA1P27694 616 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 SARSP49591 514 aaKnown RBP20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 BTG3Q14201 252 aaPredicted RBP20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 BRAPQ7Z569 592 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 KSR1Q8IVT5 923 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 MICALL1Q8N3F8 863 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 LINC01599Q8WXQ3 324 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 ATP6V0A4Q9HBG4 840 aa20.14■□□□□ 0.81
PDLIM2-215ENST00000456545 MGEA5O60502 916 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 SPATA31C1P0DKV0 1188 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 FGFR4P22455 802 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 PRPHP41219 470 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 ERVK-21P61565 698 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 KRT79Q5XKE5 535 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 SAMD11Q96NU1 681 aa20.13■□□□□ 0.81
PDLIM2-215ENST00000456545 ARHGEF35A5YM69 484 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 DGKIO75912 1065 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 MUTP22033 750 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 RARRES1P49788 294 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 LAMTOR4Q0VGL1 99 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 TFDP1Q14186 410 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 ADGRE1Q14246 886 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 MXD4Q14582 209 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 CCDC85BQ15834 202 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 CATSPER4Q7RTX7 472 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 FERMT3Q86UX7 667 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 SLC17A8Q8NDX2 589 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 FBXO22Q8NEZ5 403 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 SP7Q8TDD2 431 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 SNX29Q8TEQ0 813 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 SNX21Q969T3 373 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 C17orf80Q9BSJ5 609 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 DACT1Q9NYF0 836 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 TTC3P53804 2025 aa20.12■□□□□ 0.81
PDLIM2-215ENST00000456545 ADGRA3Q8IWK6 1321 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 USO1O60763 962 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 PAN2Q504Q3 1202 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 POTEGQ6S5H5 508 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 MAEAQ7L5Y9 396 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 SPRED2Q7Z698 418 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 RNF149Q8NC42 400 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 DBR1Q9UK59 544 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 KIAA1024Q9UPX6 916 aa20.11■□□□□ 0.81
PDLIM2-215ENST00000456545 EPOPA6NHQ4 379 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 C9IYK1 514 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 SYT1P21579 422 aa20.1■□□□□ 0.81
PDLIM2-215ENST00000456545 PHKA2P46019 1235 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms