RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 SLITRK6Q9H5Y7 841 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 DBR1Q9UK59 544 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PGRMC1O00264 195 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 TULP1O00294 542 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 ZEB2O60315 1214 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PTGER2P43116 358 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 ARID5AQ03989 594 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PPATQ06203 517 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 KCNA1Q09470 495 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PPP2R5EQ16537 467 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 DCAF17Q5H9S7 520 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 RSBN1LQ6PCB5 846 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 NT5DC3Q86UY8 548 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 CASKIN2Q8WXE0 1202 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 RFFLQ8WZ73 363 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 UIMC1Q96RL1 719 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 PSMD1Q99460 953 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 MXRA8Q9BRK3 442 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 EPB41L5Q9HCM4 733 aa13.64□□□□□ -0.23
ECHDC1-209ENST00000454591 CLIC2O15247 247 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 RAD51CO43502 376 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 EVI5O60447 810 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 CFBP00751 764 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.238e-7■■■■■ 31.9
ECHDC1-209ENST00000454591 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 TCERG1LQ5VWI1 586 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 TPH2Q8IWU9 490 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 METTL13Q8N6R0 699 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 PIGOQ8TEQ8 1089 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 PIK3R5Q8WYR1 880 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 ZIM3Q96PE6 472 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 KRT12Q99456 494 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 GPR88Q9GZN0 384 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 PGAP2Q9UHJ9 254 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 FRMD4BQ9Y2L6 1034 aa13.63□□□□□ -0.23
ECHDC1-209ENST00000454591 KCNK3O14649 394 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 APBA3O96018 575 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 IRAK1P51617 712 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 GUCY2DQ02846 1103 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 BFSP1Q12934 665 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 TTMPQ5BVD1 217 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 CFAP58Q5T655 872 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 LMO3Q8TAP4 145 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 GDAP1L1Q96MZ0 367 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 RUFY1Q96T51 708 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 ZNF577Q9BSK1 485 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 INTS2Q9H0H0 1204 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 WRAP73Q9P2S5 460 aaPredicted RBP13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 DNAJC12Q9UKB3 198 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 NFU1Q9UMS0 254 aa13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 RRP15Q9Y3B9 282 aaKnown RBP13.62□□□□□ -0.23
ECHDC1-209ENST00000454591 GRIN2DO15399 1336 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 ICAM1P05362 532 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 P4HBP07237 508 aaKnown RBP13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 ARP10275 920 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 ECHS1P30084 290 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 CAP2P40123 477 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 GALCP54803 685 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 ENPEPQ07075 957 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 DRAP1Q14919 205 aaPredicted RBP13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 DAW1Q8N136 415 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 LXNQ9BS40 222 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 CAPS2Q9BXY5 557 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 UBIAD1Q9Y5Z9 338 aa13.61□□□□□ -0.23
ECHDC1-209ENST00000454591 ATXN2Q99700 1313 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 ARHGEF35A5YM69 484 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 MYO1CO00159 1063 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 EIF3HO15372 352 aaKnown RBP eCLIP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 DHX15O43143 795 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 FAM153BP0C7A2 387 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 ERVK-9P63128 1117 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 MYL7Q01449 175 aa13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 POU5F1Q01860 360 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-209ENST00000454591 DLGAP5Q15398 846 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms