RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 NXNQ6DKJ4 435 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 FRMD5Q7Z6J6 570 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 GIMAP8Q8ND71 665 aaPredicted RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 CCNYQ8ND76 341 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 SCYL1Q96KG9 808 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.18□□□□□ -0.625e-7■■■■□ 25.4
CTC1-202ENST00000449476 HEMGNQ9BXL5 484 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 ATP6V0A4Q9HBG4 840 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 KIAA1586Q9HCI6 787 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 BCAP29Q9UHQ4 241 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 MAP2P11137 1827 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 PDXKO00764 312 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 CLDN3O15551 220 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 GYPCP04921 128 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 ACTN1P12814 892 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 FAM133BQ5BKY9 247 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 NUGGCQ68CJ6 796 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 PRR5LQ6MZQ0 368 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 GDAP1Q8TB36 358 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 RPS6KC1Q96S38 1066 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 HAUS2Q9NVX0 235 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 AFF2P51816 1311 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 CPP00450 1065 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 GARSP41250 739 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 CEP55Q53EZ4 464 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
CTC1-202ENST00000449476 PPP1R16BQ96T49 567 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
CTC1-202ENST00000449476 GRID2IPA4D2P6 1211 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 PRPSAP2O60256 369 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ABL1P00519 1130 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 NMT1P30419 496 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 SPP2Q13103 211 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 RPS6KA2Q15349 733 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 HIBCHQ6NVY1 386 aaPredicted RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 TMEM35BQ8NCS4 154 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 C11orf70Q9BRQ4 267 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 HERC5Q9UII4 1024 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 MYO1CO00159 1063 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 OSBPP22059 807 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 CNGA1P29973 690 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ITKQ08881 620 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 E2F5Q15329 346 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 EPHA7Q15375 998 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SNRNP48Q6IEG0 339 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 CENPUQ71F23 418 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 PASD1Q8IV76 773 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SCYL3Q8IZE3 742 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 PYROXD1Q8WU10 500 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 NLRP7Q8WX94 980 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 HEXIM2Q96MH2 286 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 FUCA2Q9BTY2 467 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 TAF1DQ9H5J8 278 aaPredicted RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 TRIM10Q9UDY6 481 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ZNF185O15231 689 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 EVI5O60447 810 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 PDHBP11177 359 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ARL4AP40617 200 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ZNF667Q5HYK9 610 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SLC27A3Q5K4L6 730 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 KRT39Q6A163 491 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 TMEM270Q6UE05 265 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 C16orf86Q6ZW13 317 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SAAL1Q96ER3 474 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 LRRC1Q9BTT6 524 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 NUF2Q9BZD4 464 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ZHX2Q9Y6X8 837 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 PDS5AQ29RF7 1337 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 SFNP31947 248 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 STXBP2Q15833 593 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 LINC00116Q8NCU8 138 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ZNF564Q8TBZ8 553 aaPredicted RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 RFFLQ8WZ73 363 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 ACTR5Q9H9F9 607 aaPredicted RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
CTC1-202ENST00000449476 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
CTC1-202ENST00000449476 TARSL2A2RTX5 802 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 TJP3O95049 919 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 PSMA2P25787 234 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 RNASELQ05823 741 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 SLC18A3Q16572 532 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 LDHDQ86WU2 507 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 ELOA2Q8IYF1 753 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms