RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 RGS17Q9UGC6 210 aaPredicted RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 CD151P48509 253 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF844Q08AG5 666 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 TRADDQ15628 312 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 KLHL29Q96CT2 875 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 XPO6Q96QU8 1125 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 RPS6KC1Q96S38 1066 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 TANGO6Q9C0B7 1094 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 SAMD15Q9P1V8 674 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 STK17AQ9UEE5 414 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MAPK8IP1Q9UQF2 711 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 GDAQ9Y2T3 454 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 GRID2IPA4D2P6 1211 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MARCH6O60337 910 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 HIP1RO75146 1068 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MOCS3O95396 460 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 GNA14O95837 355 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 CDC42EP5Q6NZY7 148 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MS4A14Q96JA4 679 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 FGD4Q96M96 766 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 YIPF2Q9BWQ6 316 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MMRN2Q9H8L6 949 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 ECT2Q9H8V3 914 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 KRT16P08779 473 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 SFSWAPQ12872 951 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MDM1Q8TC05 714 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZMYND12Q9H0C1 365 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZWILCHQ9H900 591 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MLXIPQ9HAP2 919 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 LRRC42Q9Y546 428 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 PCDHA13Q9Y5I0 950 aa14.58□□□□□ -0.08
SYNGAP1-204ENST00000449372 OR52Z1P0C646 297 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 MSH2P43246 934 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 NCALDP61601 193 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 LRRC63Q05C16 580 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 KLC1Q07866 573 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 NONOQ15233 471 aaKnown RBP eCLIP14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 VPS36Q86VN1 386 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 KIF2BQ8N4N8 673 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 KIFAP3Q92845 792 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 RIOX1Q9H6W3 641 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 RIC8AQ9NPQ8 531 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 DLGAP2Q9P1A6 1054 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 STX8Q9UNK0 236 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ARFGEF1Q9Y6D6 1849 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 TPD52L2O43399 206 aaKnown RBP14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 NCK2O43639 380 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 RFC5P40937 340 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 MTMR3Q13615 1198 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ELAC2Q9BQ52 826 aaKnown RBP14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ABCF3Q9NUQ8 709 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 GALNT8Q9NY28 637 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 PHF24Q9UPV7 400 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ASAP2O43150 1006 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 UBOX5O94941 541 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 SP100P23497 879 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 SHMT1P34896 483 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZNF507Q8TCN5 953 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 OPTNQ96CV9 577 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 ZDHHC15Q96MV8 337 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 VCXQ9H320 206 aa14.57□□□□□ -0.08
SYNGAP1-204ENST00000449372 PVALEFA0A1B0GWK0 134 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 SSU72P8A0A1W2PR75 194 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 H0YGN5 161 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 GOLGA8HP0CJ92 632 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 RARAP10276 462 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 AGBL2Q5U5Z8 902 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 RINLQ6ZS11 566 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 C2CD5Q86YS7 1000 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 CAMKK2Q96RR4 588 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 MTRQ99707 1265 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 NFS1Q9Y697 457 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 KIF13BQ9NQT8 1826 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 COBLL1Q53SF7 1204 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 DACT2Q5SW24 774 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 C10orf76Q5T2E6 689 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 APBB1IPQ7Z5R6 666 aaPredicted RBP14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 PIGWQ7Z7B1 504 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 LONP2Q86WA8 852 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 KRT12Q99456 494 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 C7orf25Q9BPX7 421 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 FAM129AQ9BZQ8 928 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 GGT7Q9UJ14 662 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 AKR1B1P15121 316 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 RXRBP28702 533 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 KIF11P52732 1056 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 CPVLQ9H3G5 476 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 SH2D4AQ9H788 454 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 PREBQ9HCU5 417 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 PLAGL2Q9UPG8 496 aa14.56□□□□□ -0.08
SYNGAP1-204ENST00000449372 hCG_1984214I3L0E3 225 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms