RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 KNOP1Q1ED39 458 aaKnown RBP27.43■■□□□ 1.98
RFFL-206ENST00000447669 APTXQ7Z2E3 356 aaKnown RBP27.43■■□□□ 1.98
RFFL-206ENST00000447669 SLC7A3Q8WY07 619 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 FAM167AQ96KS9 214 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 INTS13Q9NVM9 706 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 ZMYM2Q9UBW7 1377 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 ADGRA3Q8IWK6 1321 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 H3BRB1 525 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 MCPH1Q8NEM0 835 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 ASAP3Q8TDY4 903 aa27.43■■□□□ 1.98
RFFL-206ENST00000447669 TUT1Q9H6E5 874 aaKnown RBP27.43■■□□□ 1.98
RFFL-206ENST00000447669 CASP8AP2Q9UKL3 1982 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 MYADML2A6NDP7 307 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 KCNJ18B7U540 433 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 RBAK-RBAKDNI3L0D1 243 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 INSRRP14616 1297 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 CCND3P30281 292 aaPredicted RBP27.42■■□□□ 1.98
RFFL-206ENST00000447669 TBC1D8BQ0IIM8 1120 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 KCNJ12Q14500 433 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 TIPINQ9BVW5 301 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 STRA6Q9BX79 667 aa27.42■■□□□ 1.98
RFFL-206ENST00000447669 A6NJR5 290 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 CLIC2O15247 247 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 AKR1A1P14550 325 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 MKRN4PQ13434 485 aaPredicted RBP27.41■■□□□ 1.98
RFFL-206ENST00000447669 TCP11X2Q5H9J9 407 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 HAUS6Q7Z4H7 955 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 KIFAP3Q92845 792 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 TISP43B9A030 160 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 TGFB1I1O43294 461 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 MAFO75444 373 aaPredicted RBP27.41■■□□□ 1.98
RFFL-206ENST00000447669 PPP1R37O75864 691 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 GJB1P08034 283 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 HOXD8P13378 290 aaPredicted RBP27.41■■□□□ 1.98
RFFL-206ENST00000447669 KRT31Q15323 416 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 BMT2Q1RMZ1 405 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 LRRC55Q6ZSA7 311 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 TAB2Q9NYJ8 693 aa27.41■■□□□ 1.98
RFFL-206ENST00000447669 HBP1O60381 514 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 SLC26A2P50443 739 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 LRRC63Q05C16 580 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 DMP1Q13316 513 aaPredicted RBP27.4■■□□□ 1.98
RFFL-206ENST00000447669 ZNF668Q96K58 619 aaPredicted RBP27.4■■□□□ 1.98
RFFL-206ENST00000447669 NRBP1Q9UHY1 535 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 EIF3DO15371 548 aaKnown RBP eCLIP27.4■■□□□ 1.98
RFFL-206ENST00000447669 ADCY3O60266 1144 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 FKTNO75072 461 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 PGK1P00558 417 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 PRKAR2AP13861 404 aaKnown RBP27.4■■□□□ 1.98
RFFL-206ENST00000447669 GLRA2P23416 452 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 NCKAP1LP55160 1127 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 IRF5Q13568 498 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 TSG101Q99816 390 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 VPS16Q9H269 839 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 THAP9Q9H5L6 903 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 KMT5AQ9NQR1 393 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 USP20Q9Y2K6 914 aa27.4■■□□□ 1.98
RFFL-206ENST00000447669 DRC7Q8IY82 874 aa27.39■■□□□ 1.98
RFFL-206ENST00000447669 TMEM161BQ8NDZ6 487 aa27.39■■□□□ 1.98
RFFL-206ENST00000447669 KAT2BQ92831 832 aa27.39■■□□□ 1.98
RFFL-206ENST00000447669 AP5M1Q9H0R1 490 aa27.39■■□□□ 1.98
RFFL-206ENST00000447669 PCDHB13Q9Y5F0 798 aa27.39■■□□□ 1.98
RFFL-206ENST00000447669 KAT6AQ92794 2004 aa27.39■■□□□ 1.97
RFFL-206ENST00000447669 TEX33O43247 280 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 KIF20AO95235 890 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 ARL2P36404 184 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 RFC5P40937 340 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 RAET1EQ8TD07 263 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 CNOT6LQ96LI5 555 aaKnown RBP27.38■■□□□ 1.97
RFFL-206ENST00000447669 MYL3P08590 195 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 C6orf222P0C671 652 aaPredicted RBP27.38■■□□□ 1.97
RFFL-206ENST00000447669 CLCN3P51790 818 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 METTL13Q8N6R0 699 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 MRFAP1L1Q96HT8 127 aa27.38■■□□□ 1.97
RFFL-206ENST00000447669 ZNF215Q9UL58 517 aaPredicted RBP27.38■■□□□ 1.97
RFFL-206ENST00000447669 HOXD10P28358 340 aa27.37■■□□□ 1.97
RFFL-206ENST00000447669 PRPF31Q8WWY3 499 aaKnown RBP27.37■■□□□ 1.97
RFFL-206ENST00000447669 DENND3A2RUS2 1198 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 GTF2BQ00403 316 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 FKBP3Q00688 224 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 ADAM9Q13443 819 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 FSCN1Q16658 493 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 EFCAB12Q6NXP0 572 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 TYW1Q9NV66 732 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 LIMA1Q9UHB6 759 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 TRAF3IP3Q9Y228 551 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 DUSP11O75319 330 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 MYCNP04198 464 aaPredicted RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 HSPA6P17066 643 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 NR2F2P24468 414 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 KLRC1P26715 233 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 SMTNP53814 917 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 KIAA0753Q2KHM9 967 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 SYCP3Q8IZU3 236 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 ERO1AQ96HE7 468 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 IFT74Q96LB3 600 aa27.36■■□□□ 1.97
RFFL-206ENST00000447669 NTPCRQ9BSD7 190 aaKnown RBP27.36■■□□□ 1.97
RFFL-206ENST00000447669 IGKV6-21A0A0C4DH24 114 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 LRRIQ4A6NIV6 560 aa27.35■■□□□ 1.97
RFFL-206ENST00000447669 PDXKO00764 312 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms