RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 GMCL1Q96IK5 515 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 PBKQ96KB5 322 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 ATP6V1G3Q96LB4 118 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 IDI2Q9BXS1 227 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 FBXL5Q9UKA1 691 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 MYH4Q9Y623 1939 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 CIITAP33076 1130 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.051e-8■■□□□ 12.2
HERPUD1-204ENST00000439977 C10orf76Q5T2E6 689 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 MIGA2Q7L4E1 593 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ACTRT1Q8TDG2 376 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 POLR3CQ9BUI4 534 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 THAP2Q9H0W7 228 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 TMOD4Q9NZQ9 345 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 TMEM110-MUSTN1A8MSY1 372 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 EXOC3O60645 756 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 TMOD1P28289 359 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 SOX5P35711 763 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 USP8P40818 1118 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ODF2Q5BJF6 829 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ZNF746Q6NUN9 644 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ZNF720Q7Z2F6 126 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 GMCL1P1Q8NEA9 526 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ZSWIM2Q8NEG5 633 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 GLG1Q92896 1179 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 ACP6Q9NPH0 428 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 AGPAT3Q9NRZ7 376 aa14.73□□□□□ -0.05
HERPUD1-204ENST00000439977 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 SKOR1P84550 965 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 BMT2Q1RMZ1 405 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 STRIP1Q5VSL9 837 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 PHLDB3Q6NSJ2 640 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 HS2ST1Q7LGA3 356 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 MASTLQ96GX5 879 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 ZNF577Q9BSK1 485 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.72□□□□□ -0.054e-7■□□□□ 11
HERPUD1-204ENST00000439977 OLFML3Q9NRN5 406 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 TMEM150BA6NC51 233 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 GOLGA6L10A6NI86 522 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 FOXN3O00409 490 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 SLC16A3O15427 465 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 PSMD10O75832 226 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 ZBTB48P10074 688 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 FERP16591 822 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 HSPA9P38646 679 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 DCAF12L1Q5VU92 463 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 TADA2BQ86TJ2 420 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 NLGN1Q8N2Q7 840 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 SLC20A1Q8WUM9 679 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 PPM1EQ8WY54 764 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 FIZ1Q96SL8 496 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 UNC45AQ9H3U1 944 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 AMFRQ9UKV5 643 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 BTNL10A8MVZ5 291 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 E7EVH7 732 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 GCOM1H8Y6P7 765 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 MYZAPP0CAP1 466 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 SLC20A2Q08357 652 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 OLIG1Q8TAK6 271 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 CTNNBL1Q8WYA6 563 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 GLIS2Q9BZE0 524 aaPredicted RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 GPR88Q9GZN0 384 aa14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 INTS2Q9H0H0 1204 aaKnown RBP14.72□□□□□ -0.05
HERPUD1-204ENST00000439977 PDE6BP35913 854 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 DHX9Q08211 1270 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 FBXW10Q5XX13 1052 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 KDM7AQ6ZMT4 941 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 MREGQ8N565 214 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 LMBR1Q8WVP7 490 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 LXNQ9BS40 222 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 QTRT2Q9H974 415 aaKnown RBP14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 COG5Q9UP83 839 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 STXBP5LQ9Y2K9 1186 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 ATP8A1Q9Y2Q0 1164 aa14.71□□□□□ -0.05
HERPUD1-204ENST00000439977 POLR2MP0CAP2 368 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 TNFAIP3P21580 790 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 ZNF844Q08AG5 666 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 ITGB3BPQ13352 177 aaPredicted RBP14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 EFCAB13Q8IY85 973 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 STK33Q9BYT3 514 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 GOPCQ9HD26 462 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 ERVK-5Q9HDB9 667 aa14.71□□□□□ -0.06
HERPUD1-204ENST00000439977 HIP1RO75146 1068 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 PPP1R37O75864 691 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 GAP43P17677 238 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 GCLMP48507 274 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 HDLBPQ00341 1268 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 MYL7Q01449 175 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 CEP55Q53EZ4 464 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 SLFN11Q7Z7L1 901 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 SLC30A5Q8TAD4 765 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 KAT2BQ92831 832 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 KAT5Q92993 513 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 HES6Q96HZ4 224 aa14.7□□□□□ -0.06
HERPUD1-204ENST00000439977 TMBIM4Q9HC24 238 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms