RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.61e-11■■□□□ 11.7
TARDBP-203ENST00000439080 OSBPL7Q9BZF2 842 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 SUCLA2Q9P2R7 463 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 RCOR1Q9UKL0 485 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 GPR32O75388 356 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 NLRP11P59045 1033 aaKnown RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 LPIN1Q14693 890 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 FBXO47Q5MNV8 452 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 TMEM240Q5SV17 173 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 C9orf50Q5SZB4 431 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 TCP11Q8WWU5 503 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 PSPC1Q8WXF1 523 aaKnown RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 ZNF668Q96K58 619 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 SCLT1Q96NL6 688 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 PCDHA7Q9UN72 937 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 COLQQ9Y215 455 aaPredicted RBP18.81■□□□□ 0.6
TARDBP-203ENST00000439080 COL4A3BPQ9Y5P4 624 aa18.81■□□□□ 0.6
TARDBP-203ENST00000439080 TSHZ1Q6ZSZ6 1077 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 ZNF365Q70YC5 407 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 TDHQ8IZJ6 230 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 MCPH1Q8NEM0 835 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 TMEM40Q8WWA1 233 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 NLRP7Q8WX94 980 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 NLRP4Q96MN2 994 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 IPO9Q96P70 1041 aaKnown RBP18.8■□□□□ 0.6
TARDBP-203ENST00000439080 IFIH1Q9BYX4 1025 aaKnown RBP18.8■□□□□ 0.6
TARDBP-203ENST00000439080 SCAND2PQ9GZW5 306 aaPredicted RBP18.8■□□□□ 0.6
TARDBP-203ENST00000439080 ADAMTS10Q9H324 1103 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 CDHR5Q9HBB8 845 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 CHMP5Q9NZZ3 219 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 CCDC39Q9UFE4 941 aa18.8■□□□□ 0.6
TARDBP-203ENST00000439080 SSBP05455 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
TARDBP-203ENST00000439080 PLA2G4BP0C869 781 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 CRYBB1P53674 252 aaPredicted RBP18.79■□□□□ 0.6
TARDBP-203ENST00000439080 PLEKHG4Q58EX7 1191 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 SHC4Q6S5L8 630 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 MAEAQ7L5Y9 396 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 OTOP2Q7RTS6 562 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 KSR1Q8IVT5 923 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 ZNF710Q8N1W2 664 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 PRPF31Q8WWY3 499 aaKnown RBP18.79■□□□□ 0.6
TARDBP-203ENST00000439080 RUSC1Q9BVN2 902 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 POLR3FQ9H1D9 316 aaPredicted RBP18.79■□□□□ 0.6
TARDBP-203ENST00000439080 GDPD2Q9HCC8 539 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 GPRC5CQ9NQ84 441 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 BLOC1S4Q9NUP1 217 aa18.79■□□□□ 0.6
TARDBP-203ENST00000439080 FGBP02675 491 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 ACTN1P12814 892 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 CYP11B2P19099 503 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 SLC12A3P55017 1021 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 LAMTOR4Q0VGL1 99 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 PAK2Q13177 524 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 SHHQ15465 462 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 TCTN1Q2MV58 587 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 FAM102BQ5T8I3 360 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 ZNF410Q86VK4 478 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 SYT2Q8N9I0 419 aaPredicted RBP18.78■□□□□ 0.6
TARDBP-203ENST00000439080 ASAP3Q8TDY4 903 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 SEPT8Q92599 483 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 RAD54LQ92698 747 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
TARDBP-203ENST00000439080 AGO3Q9H9G7 860 aaKnown RBP18.78■□□□□ 0.6
TARDBP-203ENST00000439080 SQORQ9Y6N5 450 aa18.78■□□□□ 0.6
TARDBP-203ENST00000439080 TRIOBPQ9H2D6 2365 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 A0A087WZ62 844 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 A0A087X0B3 334 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 CD52P31358 61 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 ARL2P36404 184 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 CDC42EP1Q00587 391 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 RINT1Q6NUQ1 792 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 USP38Q8NB14 1042 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 DBF4BQ8NFT6 615 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 HERVK_113Q902F9 699 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 LARP4BQ92615 738 aaKnown RBP18.77■□□□□ 0.6
TARDBP-203ENST00000439080 APBB2Q92870 758 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 FDXACB1Q9BRP7 624 aaPredicted RBP18.77■□□□□ 0.6
TARDBP-203ENST00000439080 STK17AQ9UEE5 414 aa18.77■□□□□ 0.6
TARDBP-203ENST00000439080 NOC2LQ9Y3T9 749 aaKnown RBP18.77■□□□□ 0.6
TARDBP-203ENST00000439080 A0A1W2PPC1 479 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 RPS6KA5O75582 802 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 BAIAP3O94812 1187 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 GLRA2P23416 452 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 STAT6P42226 847 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 CAPSQ13938 189 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 MXD4Q14582 209 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-203ENST00000439080 NAALADL2Q58DX5 795 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 RRAGBQ5VZM2 374 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 RESP18Q5W5W9 173 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 FAM228AQ86W67 206 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 PDILTQ8N807 584 aa18.76■□□□□ 0.59
TARDBP-203ENST00000439080 GCOM2Q9BZD3 368 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-203ENST00000439080 MTIF3Q9H2K0 278 aaKnown RBP18.76■□□□□ 0.59
TARDBP-203ENST00000439080 CXXC1Q9P0U4 656 aaPredicted RBP18.76■□□□□ 0.59
TARDBP-203ENST00000439080 ZBBXA8MT70 800 aa18.75■□□□□ 0.59
TARDBP-203ENST00000439080 SRGAP2CP0DJJ0 459 aa18.75■□□□□ 0.59
TARDBP-203ENST00000439080 DARSP14868 501 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms