RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SURF1Q15526 300 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 FXNQ16595 210 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 GJC2Q5T442 439 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 KIAA1614Q5VZ46 1190 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 CYB5RLQ6IPT4 315 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 RCSD1Q6JBY9 416 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 RSRC2Q7L4I2 434 aaKnown RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 ADAT2Q7Z6V5 191 aaKnown RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PLEKHH3Q7Z736 793 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 GIMAP8Q8ND71 665 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 WDR66Q8TBY9 1149 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PARD3BQ8TEW8 1205 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 CDK5RAP3Q96JB5 506 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 SSBP3Q9BWW4 388 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF341Q9BYN7 854 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PDGFDQ9GZP0 370 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 PCDH18Q9HCL0 1135 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 KLHL11Q9NVR0 708 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 BTG4Q9NY30 223 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 TRHDEQ9UKU6 1024 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 FAM50BQ9Y247 325 aa4.3□□□□□ -1.72
HMGB1P12-201ENST00000438594 NPHP3-ACAD11A0A0J9YXS1 232 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 FAM83GA6ND36 823 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 B2RBV5 119 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 J3KRW8 73 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 PMM2O15305 246 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 GPR39O43194 453 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 NPHS1O60500 1241 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 HMMRO75330 724 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 HNRNPCP07910 306 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 CPEP16870 476 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 PAMP19021 973 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 OAS2P29728 719 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 EIF6P56537 245 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 KLF10Q13118 480 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 STAT4Q14765 748 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZYXQ15942 572 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 TUBB8Q3ZCM7 444 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 UNC5AQ6ZN44 842 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 OTOP3Q7RTS5 596 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZC3H18Q86VM9 953 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 CIR1Q86X95 450 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 SNX32Q86XE0 403 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 DCP2Q8IU60 420 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 SLITRK4Q8IW52 837 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 TTLL6Q8N841 843 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ST13P5Q8NFI4 369 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNF669Q96BR6 464 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 TBATAQ96M53 351 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 MCMBPQ9BTE3 642 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 AP5M1Q9H0R1 490 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 PCED1AQ9H1Q7 454 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 DDX21Q9NR30 783 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 SMYD2Q9NRG4 433 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 PPP4R1LQ9P1A2 415 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 ING1Q9UK53 422 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 TMCC3Q9ULS5 477 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 DMTF1Q9Y222 760 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 LUC7L2Q9Y383 392 aaKnown RBP4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 SPEF1Q9Y4P9 236 aa4.29□□□□□ -1.72
HMGB1P12-201ENST00000438594 C2orf71A6NGG8 1288 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 AURKAO14965 403 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 ADCY3O60266 1144 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 BAIAP3O94812 1187 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 PIK3CAP42336 1068 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 STT3AP46977 705 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 CCT5P48643 541 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 APBA1Q02410 837 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 STRN3Q13033 797 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 MINDY4Q4G0A6 757 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 IQCEQ6IPM2 695 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 RUFY4Q6ZNE9 571 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 SRLQ86TD4 932 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 LRRTM3Q86VH5 581 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 POF1BQ8WVV4 589 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 RPGRQ92834 1020 aaKnown RBP4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 NLRC4Q9NPP4 1024 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 MARCH2Q9P0N8 246 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 DDX20Q9UHI6 824 aaKnown RBP4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 FBXO10Q9UK96 956 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZBTB21Q9ULJ3 1066 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 ZNRF3Q9ULT6 936 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 TCAF1Q9Y4C2 921 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 BACE2Q9Y5Z0 518 aa4.28□□□□□ -1.72
HMGB1P12-201ENST00000438594 A0A087WZG4 1122 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 F5H423 210 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 K7ENM7 598 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 B4GALT3O60512 393 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 TMCC2O75069 709 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 SETSIPP0DME0 302 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 U2AF1L5P0DN76 240 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 IMPDH2P12268 514 aa4.27□□□□□ -1.73
HMGB1P12-201ENST00000438594 CAPN3P20807 821 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms