RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 GKAP1Q5VSY0 366 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 PAPD7Q5XG87 772 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 PON1P27169 355 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 IRX3P78415 501 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 TRADDQ15628 312 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 ZNF507Q8TCN5 953 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 ATP6V1G3Q96LB4 118 aa12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 ELAC2Q9BQ52 826 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-206ENST00000437932 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 ZBTB16Q05516 673 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF571Q7Z3V5 609 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 TADA2BQ86TJ2 420 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 TSEN2Q8NCE0 465 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PPP1R14CQ8TAE6 165 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 FAM213AQ9BRX8 229 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 EZRP15311 586 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 MAGEA9P43362 315 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 MTM1Q13496 603 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 SMAD1Q15797 465 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 IRF2BP1Q8IU81 584 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 TMEM150BA6NC51 233 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 MYO1FO00160 1098 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 CALCAP01258 141 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PBX1P40424 430 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 MTMR1Q13613 665 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 KLHDC7AQ5VTJ3 777 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 DBR1Q9UK59 544 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 AADACL2Q6P093 401 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 GLG1Q92896 1179 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PI4K2AQ9BTU6 479 aa12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-206ENST00000437932 ECEL1O95672 775 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 SYF2O95926 243 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 VAMP7P51809 220 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 C10orf76Q5T2E6 689 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 HNRNPLLQ8WVV9 542 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 GJD4Q96KN9 370 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 TTC7AQ9ULT0 858 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 ABCC6O95255 1503 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 MMEP08473 750 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PRMT1Q99873 361 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 THAP2Q9H0W7 228 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PLAGL2Q9UPG8 496 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 GYS1P13807 737 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PMS2P54278 862 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 SOX10P56693 466 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 CPA5Q8WXQ8 436 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PSMD1Q99460 953 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 ZNF148Q9UQR1 794 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 NPY5RQ15761 445 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 UNC45AQ9H3U1 944 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 STK32BQ9NY57 414 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 ANAPC7Q9UJX3 599 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 GRID2IPA4D2P6 1211 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 TISP43B9A030 160 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 SGK1O00141 431 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 IRAK1P51617 712 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 USP11P51784 963 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 GIT2Q14161 759 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 USP38Q8NB14 1042 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 SPATA20Q8TB22 786 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 ACER1Q8TDN7 264 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 FBXO28Q9NVF7 368 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 RAB20Q9NX57 234 aa12.57□□□□□ -0.4
PDLIM5-206ENST00000437932 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 EIF3HO15372 352 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 TRIM68Q6AZZ1 485 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 SCYL2Q6P3W7 929 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 GPRC5CQ9NQ84 441 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 HMGB1P1B2RPK0 211 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 FAM86B2P0C5J1 330 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 ITGA4P13612 1032 aa12.56□□□□□ -0.4
PDLIM5-206ENST00000437932 SESN3P58005 492 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms