RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SLC25A3Q00325 362 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 FSTL1Q12841 308 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 TCIRG1Q13488 830 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 ACAP1Q15027 740 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 FAM111BQ6SJ93 734 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 RTN4RL1Q86UN2 441 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 GSPT2Q8IYD1 628 aaKnown RBP5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 ANKRD53Q8N9V6 530 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 MAGEL2Q9UJ55 1249 aa5.06□□□□□ -1.6
HMGB1P31-201ENST00000437242 TRAF5O00463 557 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 FOXN1O15353 648 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 NPTXRO95502 500 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 KRT4P19013 534 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 ROM1Q03395 351 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 TOB2Q14106 344 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 DGKDQ16760 1214 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 TMEM177Q53S58 311 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 KRT40Q6A162 431 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 ZNF428Q96B54 188 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 FOXRED1Q96CU9 486 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 GPHA2Q96T91 129 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 BOCQ9BWV1 1114 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 GPR87Q9BY21 358 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 GPRC5BQ9NZH0 403 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 RCAN3Q9UKA8 241 aa5.05□□□□□ -1.6
HMGB1P31-201ENST00000437242 UBE2QL1A1L167 161 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 C2orf78A6NCI8 922 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 KRT37O76014 449 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 PRLP01236 227 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 FNTBP49356 437 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 RGS3P49796 1198 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 SMAD3P84022 425 aaKnown RBP5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 SLC6A3Q01959 620 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 GAGE13Q4V321 117 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 FKBP15Q5T1M5 1219 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 LAIR1Q6GTX8 287 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 DPY19L2P1Q6NXN4 242 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 CC2D1AQ6P1N0 951 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 Q6ZPA2 131 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 BRAPQ7Z569 592 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 RPUSD2Q8IZ73 545 aaKnown RBP5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 IGSF22Q8N9C0 903 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 SLC25A43Q8WUT9 341 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 SCLYQ96I15 445 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 IL23AQ9NPF7 189 aa5.04□□□□□ -1.6
HMGB1P31-201ENST00000437242 TCRBV16S1A1N1A0A5B0 115 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 FAM20BO75063 409 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 ATP2B1P20020 1258 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 BMP5P22003 454 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 ADAM8P78325 824 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 SLFN12LQ6IEE8 588 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 SYNE4Q8N205 404 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 HAS1Q92839 578 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 DEPDC7Q96QD5 511 aa5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 CCDC9Q9Y3X0 531 aaKnown RBP5.03□□□□□ -1.6
HMGB1P31-201ENST00000437242 UBA6A0AVT1 1052 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 GOLGA6L6A8MZA4 724 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 IPO13O94829 963 aaKnown RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 VSIG10L2P0DP72 767 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZBTB48P10074 688 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 KIF11P52732 1056 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 RASA3Q14644 834 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 MFSD5Q6N075 450 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 MB21D1Q8N884 522 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 ATXN2LQ8WWM7 1075 aaKnown RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 NKD2Q969F2 451 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 PGBD4Q96DM1 585 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 DYDC2Q96IM9 177 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 WDR92Q96MX6 357 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 MRPL4Q9BYD3 311 aaKnown RBP5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 TANGO6Q9C0B7 1094 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 KCMF1Q9P0J7 381 aa5.02□□□□□ -1.61
HMGB1P31-201ENST00000437242 XDHP47989 1333 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 KLRG2A4D1S0 409 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 MFAP3LO75121 409 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 TOX4O94842 621 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 RABGGTBP53611 331 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 ANTXR2P58335 489 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 ARHGAP44Q17R89 818 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 NAALADL2Q58DX5 795 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 RABL3Q5HYI8 236 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 TTC38Q5R3I4 469 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 PRAMEF9Q5VWM5 478 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 OTOP1Q7RTM1 612 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 FGD2Q7Z6J4 655 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 MRGPREQ86SM8 312 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 CLEC14AQ86T13 490 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 ELOA2Q8IYF1 753 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZNF276Q8N554 614 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 PLA2G15Q8NCC3 412 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 ZSWIM2Q8NEG5 633 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 MAML3Q96JK9 1138 aa5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 HIRIP3Q9BW71 556 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P31-201ENST00000437242 PCIF1Q9H4Z3 704 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms