RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 GAS7O60861 476 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 ATG7O95352 703 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 ITGB1P05556 798 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 CYP3A4P08684 503 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 FAM86B2P0C5J1 330 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 LAG3P18627 525 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 CDC27P30260 824 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 ADD1P35611 737 aaKnown RBP8.77□□□□□ -1.01
VPS50-203ENST00000436177 NRIP1P48552 1158 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 CRYBB1P53674 252 aaPredicted RBP8.77□□□□□ -1.01
VPS50-203ENST00000436177 COL19A1Q14993 1142 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 Q6ZUG5 572 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 KIAA0319LQ8IZA0 1049 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 KLHL23Q8NBE8 558 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 RNF169Q8NCN4 708 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 POF1BQ8WVV4 589 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 BBXQ8WY36 941 aaPredicted RBP8.77□□□□□ -1.01
VPS50-203ENST00000436177 SLC26A6Q9BXS9 759 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 TLE6Q9H808 572 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 PUF60Q9UHX1 559 aaKnown RBP8.77□□□□□ -1.01
VPS50-203ENST00000436177 ST3GAL5Q9UNP4 418 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 NOC2LQ9Y3T9 749 aaKnown RBP8.77□□□□□ -1.01
VPS50-203ENST00000436177 PCDHA10Q9Y5I2 948 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 IGLV3-22A0A075B6J6 115 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 IGKV6D-21A0A0A0MT36 114 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 CHMP2AO43633 222 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 TBX10O75333 385 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 C22orf31O95567 290 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 VTNP04004 478 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 ZSCAN20P17040 1043 aaPredicted RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 PPM1AP35813 382 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 GATMP50440 423 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 JAK3P52333 1124 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 NLRP5P59047 1200 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 UBE3AQ05086 875 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 SMAD2Q15796 467 aaKnown RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 CTC1Q2NKJ3 1217 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 CPLX2Q6PUV4 134 aaKnown RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 RBM23Q86U06 439 aaKnown RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 EFHBQ8N7U6 833 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 TMEM87AQ8NBN3 555 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 PHKBQ93100 1093 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 OSMRQ99650 979 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 TEKT3Q9BXF9 490 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 RNF26Q9BY78 433 aaPredicted RBP8.76□□□□□ -1.01
VPS50-203ENST00000436177 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 ERVK-5Q9HDB9 667 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 ENTPD7Q9NQZ7 604 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 TLR9Q9NR96 1032 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 NRBP2Q9NSY0 501 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 TMEM161AQ9NX61 479 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 GABBR1Q9UBS5 961 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 KAT6AQ92794 2004 aa8.76□□□□□ -1.01
VPS50-203ENST00000436177 LINC01565O15544 149 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 DHX15O43143 795 aaKnown RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 MBTPS2O43462 519 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 FGF18O76093 207 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 OATP04181 439 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 LINC00271P0C7V0 271 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 CPA1P15085 419 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 RPS6KB1P23443 525 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 SFNP31947 248 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 CA8P35219 290 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 GTF2F1P35269 517 aaKnown RBP eCLIP8.75□□□□□ -1.01
VPS50-203ENST00000436177 LTBRP36941 435 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 DNM2P50570 870 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 CLCN3P51790 818 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 PRKCEQ02156 737 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 TBC1D8BQ0IIM8 1120 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 BMS1Q14692 1282 aaKnown RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 LRCH2Q5VUJ6 765 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 PDE12Q6L8Q7 609 aaKnown RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 RTN4RL1Q86UN2 441 aaPredicted RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 LRRC43Q8N309 656 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 SPPL3Q8TCT6 385 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 RASGRP4Q8TDF6 673 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 NLRP7Q8WX94 980 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 CCDC136Q96JN2 1154 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 ZNF558Q96NG5 402 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 RIT2Q99578 217 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 TMEM117Q9H0C3 514 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 TMX1Q9H3N1 280 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 DISC1Q9NRI5 854 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 RGS18Q9NS28 235 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 FAM217BQ9NTX9 383 aaPredicted RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 VPS54Q9P1Q0 977 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
VPS50-203ENST00000436177 SNX14Q9Y5W7 946 aa8.75□□□□□ -1.01
VPS50-203ENST00000436177 NID2Q14112 1375 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 C9IYK1 514 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
VPS50-203ENST00000436177 MGEA5O60502 916 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms