RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 STRA6Q9BX79 667 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 INTS2Q9H0H0 1204 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 EPB41L5Q9HCM4 733 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GINM1Q9NU53 330 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 STK32BQ9NY57 414 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GOLGA6AQ9NYA3 693 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 LARSQ9P2J5 1176 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 TMEM59LQ9UK28 342 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 DBR1Q9UK59 544 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 DNAJC12Q9UKB3 198 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 NCANO14594 1321 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 MYH10P35580 1976 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 PGRMC1O00264 195 aaKnown RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.59
CD44-210ENST00000434472 TMEM253P0C7T8 217 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 MYL7Q01449 175 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GUCY2DQ02846 1103 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 KCNA1Q09470 495 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 ZC2HC1CQ53FD0 456 aaPredicted RBP11.35□□□□□ -0.59
CD44-210ENST00000434472 CFAP58Q5T655 872 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 PEX26Q7Z412 305 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 SLC17A8Q8NDX2 589 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 SLC30A5Q8TAD4 765 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 SCFD2Q8WU76 684 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 GDAP1L1Q96MZ0 367 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 ACCSQ96QU6 501 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 IWS1Q96ST2 819 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 LXNQ9BS40 222 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 TSPYL1Q9H0U9 437 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 CCPG1Q9ULG6 757 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
CD44-210ENST00000434472 F8VZ95 297 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 WDR46O15213 610 aaKnown RBP11.34□□□□□ -0.59
CD44-210ENST00000434472 CEP104O60308 925 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 EVI5O60447 810 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 EXOC3O60645 756 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 SHOX2O60902 331 aaPredicted RBP11.34□□□□□ -0.59
CD44-210ENST00000434472 HIP1RO75146 1068 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 PPP1R37O75864 691 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 LYPLA2O95372 231 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 TNFAIP3P21580 790 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 UBXN2AP68543 259 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 CUL1Q13616 776 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 DRAP1Q14919 205 aaPredicted RBP11.34□□□□□ -0.59
CD44-210ENST00000434472 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
CD44-210ENST00000434472 CD302Q8IX05 232 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 RASGEF1CQ8N431 466 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 C1orf131Q8NDD1 294 aaKnown RBP11.34□□□□□ -0.59
CD44-210ENST00000434472 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD44-210ENST00000434472 SLITRK6Q9H5Y7 841 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 APEX2Q9UBZ4 518 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
CD44-210ENST00000434472 TMCO5BA8MYB1 307 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 K7ENM7 598 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 MAPK13O15264 365 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 RAD17O75943 681 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 GLI1P08151 1106 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 DNA2P51530 1060 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 CYP2J2P51589 502 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 GALCP54803 685 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 BFSP1Q12934 665 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 PPP2R5EQ16537 467 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 CCDC26Q8TAB7 109 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 CASKIN2Q8WXE0 1202 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 IFT81Q8WYA0 676 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 CTNNBL1Q8WYA6 563 aaPredicted RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 LPAR1Q92633 364 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 ST6GALNAC4Q9H4F1 302 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 TBC1D22BQ9NU19 505 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 AJAP1Q9UKB5 411 aaPredicted RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
CD44-210ENST00000434472 UBIAD1Q9Y5Z9 338 aa11.33□□□□□ -0.6
CD44-210ENST00000434472 PMM2O15305 246 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 PPFIA4O75335 1185 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 FDX1P10109 184 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 PLS3P13797 630 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 MAPK7Q13164 816 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 COG2Q14746 738 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 KIF22Q14807 665 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 ZYXQ15942 572 aaKnown RBP11.32□□□□□ -0.6
CD44-210ENST00000434472 LRRC31Q6UY01 552 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 DAAM2Q86T65 1068 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
CD44-210ENST00000434472 BANK1Q8NDB2 785 aa11.32□□□□□ -0.6
CD44-210ENST00000434472 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms