RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 VCPKMTQ9H867 229 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 GCNT4Q9P109 453 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 NOC2LQ9Y3T9 749 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 ZNF646O15015 1829 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 CES2O00748 559 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 CLSTN1O94985 981 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 GCNT3O95395 438 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 MYZAPP0CAP1 466 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 CUL1Q13616 776 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 TNIP1Q15025 636 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 DAAM2Q86T65 1068 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 OTUD6BQ8N6M0 293 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 DEFB129Q9H1M3 183 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 CLIC2O15247 247 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 NR3C1P04150 777 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 HSD17B3P37058 310 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 MDH1P40925 334 aaKnown RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 SEC24CP53992 1094 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 NAA35Q5VZE5 725 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 LRRC57Q8N9N7 239 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 UBLCP1Q8WVY7 318 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
SMPD4-206ENST00000433118 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■□□ 15.9
SMPD4-206ENST00000433118 BCCIPQ9P287 314 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMPD4-206ENST00000433118 GREB1LQ9C091 1923 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 H0YHG0 523 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 PDXKO00764 312 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 H2AFZP0C0S5 128 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 RPL13P26373 211 aaKnown RBP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 CASP4P49662 377 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 GTF2A1P52655 376 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 GJB7Q6PEY0 223 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 H2AFVQ71UI9 128 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 U2AF1L4Q8WU68 220 aaKnown RBP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 SCFD2Q8WU76 684 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 LMBR1Q8WVP7 490 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMPD4-206ENST00000433118 KAT2BQ92831 832 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 BHMT2Q9H2M3 363 aa11.46□□□□□ -0.57
SMPD4-206ENST00000433118 FAM170AA1A519 330 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 E7EVH7 732 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 ASNSP08243 561 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 RPA1P27694 616 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 HOXD13P35453 343 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 ITGB3BPQ13352 177 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-206ENST00000433118 EPHA7Q15375 998 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 PTGISQ16647 500 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 FAM83AQ86UY5 434 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 PPANQ9NQ55 473 aaKnown RBP11.46□□□□□ -0.58
SMPD4-206ENST00000433118 AMACRQ9UHK6 382 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-206ENST00000433118 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
SMPD4-206ENST00000433118 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 DDX39AO00148 427 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 GFPT2O94808 682 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 CYP3A7P24462 503 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ECHS1P30084 290 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 SPIRE1Q08AE8 756 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ODF2Q5BJF6 829 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 MICALCLQ6ZW33 695 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ETNPPLQ8TBG4 499 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ZNF473Q8WTR7 871 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 CALR3Q96L12 384 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 BCAS3Q9H6U6 928 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 TMBIM4Q9HC24 238 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 METTL14Q9HCE5 456 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 RGL1Q9NZL6 768 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 CAPN7Q9Y6W3 813 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 SLC26A4O43511 780 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ITGA4P13612 1032 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 PRKCIP41743 596 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 KCNA1Q09470 495 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 MTMR2Q13614 643 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ANGEL2Q5VTE6 544 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 SPATS2Q86XZ4 545 aaKnown RBP11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ARFGAP2Q8N6H7 521 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 SLC35C1Q96A29 364 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 NEUROG2Q9H2A3 272 aa11.45□□□□□ -0.58
SMPD4-206ENST00000433118 ASTN1O14525 1302 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms