RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CLTBP09497 229 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 GAP43P17677 238 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
CHD4-202ENST00000430771 CDC42EP1Q00587 391 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 BFSP2Q13515 415 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 TFDP1Q14186 410 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 HIC1Q14526 733 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 MXD4Q14582 209 aaPredicted RBP12.19□□□□□ -0.46
CHD4-202ENST00000430771 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 RUFY4Q6ZNE9 571 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 MAEAQ7L5Y9 396 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 RPAINQ86UA6 219 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 CCDC65Q8IXS2 484 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 NME8Q8N427 588 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 GPT2Q8TD30 523 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 TMEM143Q96AN5 459 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 IFT74Q96LB3 600 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 SCLT1Q96NL6 688 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 C7orf25Q9BPX7 421 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 C17orf75Q9HAS0 396 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 PARVGQ9HBI0 331 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 PDLIM7Q9NR12 457 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
CHD4-202ENST00000430771 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
CHD4-202ENST00000430771 KCNG1Q9UIX4 513 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 SIP14410 1827 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 PHLPP2Q6ZVD8 1323 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.18□□□□□ -0.46
CHD4-202ENST00000430771 ASAP2O43150 1006 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 SMC2O95347 1197 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 IDEP14735 1019 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 ARL2P36404 184 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 MRPS6P82932 125 aaKnown RBP12.18□□□□□ -0.46
CHD4-202ENST00000430771 TLE2Q04725 743 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 RBL2Q08999 1139 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 NFKBIBQ15653 356 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 KLHL40Q2TBA0 621 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 SKOR2Q2VWA4 1001 aaPredicted RBP12.18□□□□□ -0.46
CHD4-202ENST00000430771 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 ZNF410Q86VK4 478 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 STAMQ92783 540 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 GPRC5CQ9NQ84 441 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 TRPV2Q9Y5S1 764 aa12.18□□□□□ -0.46
CHD4-202ENST00000430771 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 H0YCG3 227 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 VTNP04004 478 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 PLS3P13797 630 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 SCP2P22307 547 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 ABCD1P33897 745 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 THPOP40225 353 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 NAMPTP43490 491 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 PHKA2P46019 1235 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 ZNF131P52739 623 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 SMTNP53814 917 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
CHD4-202ENST00000430771 DPYDQ12882 1025 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 MAPK7Q13164 816 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 DRP2Q13474 957 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 CUL4BQ13620 913 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 GIT2Q14161 759 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 ZBTB8OSQ8IWT0 167 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 DNAJC19Q96DA6 116 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 ZBTB10Q96DT7 871 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 RMND1Q9NWS8 449 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 PRKAG2Q9UGJ0 569 aa12.17□□□□□ -0.46
CHD4-202ENST00000430771 NPHP3-ACAD11A0A0J9YXS1 232 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 PVALEFA0A1B0GWK0 134 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 LRRIQ4A6NIV6 560 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 RSPH10B2B2RC85 870 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 K7ENM7 598 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 CTSHP09668 335 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 RSPH10BP0C881 870 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 GLRA2P23416 452 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 GPC3P51654 580 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 FAAP100Q0VG06 881 aa12.16□□□□□ -0.46
CHD4-202ENST00000430771 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms