RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PAGR1Q9BTK6 254 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
RIF1-204ENST00000430328 GFPT2O94808 682 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
RIF1-204ENST00000430328 DDI1Q8WTU0 396 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 UVRAGQ9P2Y5 699 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 PCDHA5Q9Y5H7 936 aa17.5■□□□□ 0.39
RIF1-204ENST00000430328 PSMA2P25787 234 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 UNC45BQ8IWX7 931 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 KCNA2P16389 499 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 USP28Q96RU2 1077 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 MYO1GB0I1T2 1018 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 NACC1Q96RE7 527 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 ZC3H7BQ9UGR2 993 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 ZNF197O14709 1029 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 CALR3Q96L12 384 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 TFAMQ00059 246 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 PDCD6IPQ8WUM4 868 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 AS3MTQ9HBK9 375 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 NEMP1O14524 444 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 TOM1O60784 492 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 DENND6AQ8IWF6 608 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 PIGUQ9H490 435 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.49■□□□□ 0.39
RIF1-204ENST00000430328 GGA1Q9UJY5 639 aa17.49■□□□□ 0.39
RIF1-204ENST00000430328 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 E4F1Q66K89 784 aaPredicted RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 RNF135Q8IUD6 432 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 MFN1Q8IWA4 741 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 TNIP2Q8NFZ5 429 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 EEF2KMTQ96G04 330 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 VIPAS39Q9H9C1 493 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 CFAP65Q6ZU64 1925 aaKnown RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 CENPAP49450 140 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 LRRC36Q1X8D7 754 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 SLFN12LQ6IEE8 588 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 ELMSAN1Q6PJG2 1045 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 P3H2Q8IVL5 708 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 TTC13Q8NBP0 860 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 MORC2Q9Y6X9 1032 aaPredicted RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 SUPT3HB4E1H0 165 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 MAP3K13O43283 966 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 FKBP3Q00688 224 aaKnown RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 AASDHQ4L235 1098 aaPredicted RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 CMTM5Q96DZ9 223 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 KIAA1024Q9UPX6 916 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 PTGDRQ13258 359 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 ZNF827Q17R98 1081 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 LAD1O00515 517 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 TSPAN9O75954 239 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 KRT76Q01546 638 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 ZNF654Q8IZM8 581 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 AP4S1Q9Y587 144 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 SAC3D1A6NKF1 404 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 TIMM10P62072 90 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 NUP93Q8N1F7 819 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 SNRNP27Q8WVK2 155 aaKnown RBP17.48■□□□□ 0.39
RIF1-204ENST00000430328 ACCSQ96QU6 501 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
RIF1-204ENST00000430328 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 KRT31Q15323 416 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 CDO1Q16878 200 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 THEMIS2Q5TEJ8 643 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 HIC2Q96JB3 615 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 LRFN2Q9ULH4 789 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 RSPH10B2B2RC85 870 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 RSPH10BP0C881 870 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 BTN2A1Q7KYR7 527 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 SRPK1Q96SB4 655 aaKnown RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 ZWILCHQ9H900 591 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 RMDN1Q96DB5 314 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 TMEM206Q9H813 350 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 MRGBPQ9NV56 204 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 SHROOM1Q2M3G4 852 aaPredicted RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 SGSM1Q2NKQ1 1148 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 SPDYAQ5MJ70 313 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 STX12Q86Y82 276 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 RHOT2Q8IXI1 618 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 FGGP02679 453 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 MKRN3Q13064 507 aaKnown RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 ZNF274Q96GC6 653 aaPredicted RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 USP40Q9NVE5 1235 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 IMPAD1Q9NX62 359 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 MRPL39Q9NYK5 338 aaKnown RBP17.47■□□□□ 0.39
RIF1-204ENST00000430328 CSADQ9Y600 493 aa17.47■□□□□ 0.39
RIF1-204ENST00000430328 LRRIQ3A6PVS8 624 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms