RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 BTBD19C9JJ37 291 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 GPC3P51654 580 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 POLR2FP61218 127 aaKnown RBP14.02□□□□□ -0.17
PTCH1-207ENST00000429896 EFCAB12Q6NXP0 572 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 ILDR2Q71H61 639 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 SH3BP5LQ7L8J4 393 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 CCSER1Q9C0I3 900 aa14.02□□□□□ -0.17
PTCH1-207ENST00000429896 ZBTB16Q05516 673 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 BEST2Q8NFU1 509 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 CTTNBP2NLQ9P2B4 639 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 AFG3L2Q9Y4W6 797 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 RPS6KA5O75582 802 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 ARP10275 920 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 BPIFB4P59827 614 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 JAKMIP2Q96AA8 810 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 AGXT2Q9BYV1 514 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 A1CFQ9NQ94 594 aaKnown RBP14.01□□□□□ -0.17
PTCH1-207ENST00000429896 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 MAN2A1Q16706 1144 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 ZNF484Q5JVG2 852 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 PLA2G4FQ68DD2 849 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 GOLPH3LQ9H4A5 285 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 NXF1Q9UBU9 619 aaKnown RBP14.01□□□□□ -0.17
PTCH1-207ENST00000429896 SPOPO43791 374 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 SLC37A4O43826 429 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 INTS8Q75QN2 995 aaKnown RBP14.01□□□□□ -0.17
PTCH1-207ENST00000429896 AGO4Q9HCK5 861 aaKnown RBP14.01□□□□□ -0.17
PTCH1-207ENST00000429896 ANKEF1Q9NU02 776 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 DAPK3O43293 454 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 MXI1P50539 228 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 METTL7BQ6UX53 244 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 XXYLT1Q8NBI6 393 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 SHCBP1Q8NEM2 672 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 XPNPEP3Q9NQH7 507 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 IMPACTQ9P2X3 320 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 C5P01031 1676 aa14.01□□□□□ -0.17
PTCH1-207ENST00000429896 TGFB3P10600 412 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 HAUS6Q7Z4H7 955 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 POLR3CQ9BUI4 534 aaPredicted RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 XPO4Q9C0E2 1151 aaKnown RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 ROBO3Q96MS0 1386 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 TPD52P55327 224 aaPredicted RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 EVCP57679 992 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 PTK2Q05397 1052 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 GABPAQ06546 454 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 MAP2K5Q13163 448 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 PPP1R7Q15435 360 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 SHC4Q6S5L8 630 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 PGBD4Q96DM1 585 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 APBA2Q99767 749 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 TMEM62Q0P6H9 643 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 PKN1Q16512 942 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 CCDC122Q5T0U0 273 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 TMTC1Q8IUR5 882 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 ZWINTO95229 277 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 KCNA3P22001 575 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 GEN1Q17RS7 908 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 SREK1Q8WXA9 508 aaKnown RBP14□□□□□ -0.17
PTCH1-207ENST00000429896 CAPN9O14815 690 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 CNTN2Q02246 1040 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 RNF208Q9H0X6 261 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 TMEM60Q9H2L4 133 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 RASAL2Q9UJF2 1139 aa14□□□□□ -0.17
PTCH1-207ENST00000429896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 NR3C1P04150 777 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 FGRP09769 529 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 ACTN1P12814 892 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 EVX2Q03828 476 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 TMEM132BQ14DG7 1078 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 NTRK3Q16288 839 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 KNOP1Q1ED39 458 aaKnown RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 THEM5Q8N1Q8 247 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 AFG1LQ8WV93 481 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 SH2D3AQ9BRG2 576 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 NPHP3-ACAD11A0A0J9YXS1 232 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 ELF1P32519 619 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 LY6KQ17RY6 165 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PLS3P13797 630 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 RPA1P27694 616 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PAK2Q13177 524 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 TLK2Q86UE8 772 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 U2AF1L4Q8WU68 220 aaKnown RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 TYW1Q9NV66 732 aaKnown RBP13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PLA2G6O60733 806 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 FSTL1Q12841 308 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 GAS2L3Q86XJ1 694 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 PLEKHA4Q9H4M7 779 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 IKBKBO14920 756 aa13.99□□□□□ -0.17
PTCH1-207ENST00000429896 THPOP40225 353 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms