RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 PPP2R2AP63151 447 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 TCERG1LQ5VWI1 586 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 PPP1R18Q6NYC8 613 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 CCDC65Q8IXS2 484 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 ARFGAP2Q8N6H7 521 aa18.35■□□□□ 0.53
PCDH8P1-201ENST00000428983 PPP1R2P41236 205 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 GIT2Q14161 759 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 MAEAQ7L5Y9 396 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 C1orf131Q8NDD1 294 aaKnown RBP18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 DPH5Q9H2P9 285 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 GGA2Q9UJY4 613 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 PRR12Q9ULL5 1215 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 SIPA1L1O43166 1804 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 LRRC37AA6NMS7 1700 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 BMP3P12645 472 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 PLS1Q14651 629 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 ZC2HC1CQ53FD0 456 aaPredicted RBP18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 TATDN1Q6P1N9 297 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 CPLX4Q7Z7G2 160 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 CACNA2D3Q8IZS8 1091 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
PCDH8P1-201ENST00000428983 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 PPP1R12BO60237 982 aaPredicted RBP18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 KIF4AO95239 1232 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 PTK2Q05397 1052 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 KCNH2Q12809 1159 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 ORC2Q13416 577 aaPredicted RBP18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 COBLL1Q53SF7 1204 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 LRIG3Q6UXM1 1119 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 TPH2Q8IWU9 490 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 SCFD2Q8WU76 684 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 MKL1Q969V6 931 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 NT5C3AQ9H0P0 336 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 VEZTQ9HBM0 779 aa18.33■□□□□ 0.53
PCDH8P1-201ENST00000428983 NRXN2Q9P2S2 1712 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 TMCO5BA8MYB1 307 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 PPIP5K2O43314 1243 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 KRT71Q3SY84 523 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 RBM26Q5T8P6 1007 aaKnown RBP18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 METTL13Q8N6R0 699 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 MIEF2Q96C03 454 aa18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 ACTR5Q9H9F9 607 aaPredicted RBP18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 AJAP1Q9UKB5 411 aaPredicted RBP18.33■□□□□ 0.52
PCDH8P1-201ENST00000428983 TTI1O43156 1089 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 GCFC2P16383 781 aaKnown RBP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 EPS15P42566 896 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 COG2Q14746 738 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 ACCSLQ4AC99 568 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 DCAF4Q8WV16 495 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 HVCN1Q96D96 273 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 PCDHB13Q9Y5F0 798 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 NMT1P30419 496 aaKnown RBP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 USP11P51784 963 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 DHX9Q08211 1270 aaKnown RBP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 PSMD2Q13200 908 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 DRP2Q13474 957 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 TRIM59Q8IWR1 403 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 TATDN2Q93075 761 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 WDR18Q9BV38 432 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 IDI2Q9BXS1 227 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 DNM3Q9UQ16 869 aa18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 NOC2LQ9Y3T9 749 aaKnown RBP18.32■□□□□ 0.52
PCDH8P1-201ENST00000428983 GCNT3O95395 438 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 PAX7P23759 505 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 LRRC45Q96CN5 670 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 KRIT1O00522 736 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 AKAP3O75969 853 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 COPB2P35606 906 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 CCT6BQ92526 530 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 PNMA2Q9UL42 364 aa18.31■□□□□ 0.52
PCDH8P1-201ENST00000428983 DRD4P21917 467 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 CUL1Q13616 776 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 GKAP1Q5VSY0 366 aaPredicted RBP18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 ADAT2Q7Z6V5 191 aaKnown RBP18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 EIF2AK1Q9BQI3 630 aaKnown RBP18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 TRIM51Q9BSJ1 452 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 TMEM39BQ9GZU3 492 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 WRAP73Q9P2S5 460 aaPredicted RBP18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 KDM3AQ9Y4C1 1321 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 ASIC2Q16515 512 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 HYIQ5T013 277 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 RUFY4Q6ZNE9 571 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 TMC3Q7Z5M5 1100 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 RDH13Q8NBN7 331 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 EDEM3Q9BZQ6 932 aa18.3■□□□□ 0.52
PCDH8P1-201ENST00000428983 BAIAP2L1Q9UHR4 511 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms