RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, human

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC144A-208	ENST00000428950	ZKSCAN5	Q9Y2L8	839 aa		4.65	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SPO11	Q9Y5K1	396 aa		4.65	□□□□□ -1.67
CCDC144A-208	ENST00000428950	FAM83G	A6ND36	823 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	H2AFY	O75367	372 aa	Known RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	CDC45	O75419	566 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ATP2A2	P16615	1042 aa	Known RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MSX2	P35548	267 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ADCY1	Q08828	1119 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	FOXL1	Q12952	345 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RIN1	Q13671	783 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MAMDC4	Q6UXC1	1216 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RNF207	Q6ZRF8	634 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	LRRTM3	Q86VH5	581 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	KIF18B	Q86Y91	864 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950		Q8N1X5	172 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	C7orf31	Q8N865	590 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NINJ1	Q92982	152 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NKD2	Q969F2	451 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	GFM2	Q969S9	779 aa	Known RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	TOMM22	Q9NS69	142 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PLA2G3	Q9NZ20	509 aa		4.64	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ZNF891	A8MT65	544 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	AKAP8	O43823	692 aa	Known RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	GAS7	O60861	476 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	F2	P00734	622 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NEK4	P51957	841 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	BCAR1	P56945	870 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ANTXR2	P58335	489 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ATP2C1	P98194	919 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	DSG1	Q02413	1049 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	GRM7	Q14831	915 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	BMP8A	Q7Z5Y6	402 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	JAZF1	Q86VZ6	243 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PHYKPL	Q8IUZ5	450 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NIM1K	Q8IY84	436 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	EFHB	Q8N7U6	833 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RABGGTA	Q92696	567 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RPGR	Q92834	1020 aa	Known RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	GCDH	Q92947	438 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	DYDC2	Q96IM9	177 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	HAPLN2	Q9GZV7	340 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ZMAT4	Q9H898	229 aa		4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	AGO3	Q9H9G7	860 aa	Known RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MRPL42	Q9Y6G3	142 aa	Known RBP	4.63	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SUV39H1	O43463	412 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	FSHB	P01225	129 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	AMH	P03971	560 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ACRV1	P26436	265 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	STAT3	P40763	770 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ADCY7	P51828	1080 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ADCY2	Q08462	1091 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NRN1L	Q496H8	165 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	TIGD7	Q6NT04	549 aa	Predicted RBP	4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	CNNM4	Q6P4Q7	775 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	KANSL1	Q7Z3B3	1105 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ADGRE4P	Q86SQ3	457 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ZZZ3	Q8IYH5	903 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	NXPE1	Q8N323	547 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SLC16A11	Q8NCK7	471 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	CHTF18	Q8WVB6	975 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	TMEM176A	Q96HP8	235 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	WDR92	Q96MX6	357 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	FEZ1	Q99689	392 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MYL10	Q9BUA6	226 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MTFR1L	Q9H019	292 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SLC6A15	Q9H2J7	730 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	TLR9	Q9NR96	1032 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	IFT57	Q9NWB7	429 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	THG1L	Q9NWX6	298 aa	Known RBP	4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	SRRD	Q9UH36	339 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PLAA	Q9Y263	795 aa		4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RBM8A	Q9Y5S9	174 aa	Known RBP	4.62	□□□□□ -1.67
CCDC144A-208	ENST00000428950		A0A1W2PRX2	142 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	C2orf78	A6NCI8	922 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	FZD7	O75084	574 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PRPF6	O94906	941 aa	Known RBP	4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	CD40	P25942	277 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	GDF5	P43026	501 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	BPIFB4	P59827	614 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	ADAM8	P78325	824 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	HHEX	Q03014	270 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	TCIRG1	Q13488	830 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	USP39	Q53GS9	565 aa	Known RBP	4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	KIAA1841	Q6NSI8	718 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	CLEC14A	Q86T13	490 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PASD1	Q8IV76	773 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	DHX37	Q8IY37	1157 aa	Known RBP	4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	PPM1K	Q8N3J5	372 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	D2HGDH	Q8N465	521 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	RTF1	Q92541	710 aa	Known RBP	4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	POFUT1	Q9H488	388 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	MTG2	Q9H4K7	406 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950	DNAI1	Q9UI46	699 aa		4.61	□□□□□ -1.67
CCDC144A-208	ENST00000428950		A0A0A6YYJ9	748 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms